RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SEBOXQ9HB31 216 aaPredicted RBP15.31■□□□□ 0.04
SHANK1-201ENST00000293441 GAR1Q9NY12 217 aaKnown RBP15.31■□□□□ 0.04
SHANK1-201ENST00000293441 ASCC3Q8N3C0 2202 aaKnown RBP15.31■□□□□ 0.04
SHANK1-201ENST00000293441 LIPT2A6NK58 231 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 RHOBP62745 196 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 OXA1LQ15070 435 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 DEGS2Q6QHC5 323 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 HSD17B10Q99714 261 aaKnown RBP15.31■□□□□ 0.04
SHANK1-201ENST00000293441 FKBP11Q9NYL4 201 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 RFPL4AA6NLU0 287 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 RFPL4AL1F8VTS6 287 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 K7ESF4 209 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 SPNP16150 400 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 TNXAQ16473 311 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 DPF1Q92782 380 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 BCL2L2Q92843 193 aaPredicted RBP15.3■□□□□ 0.04
SHANK1-201ENST00000293441 CHRDL1Q9BU40 450 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.3■□□□□ 0.04
SHANK1-201ENST00000293441 DOK5Q9P104 306 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 OR5B21A6NL26 309 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 RNF165Q6ZSG1 346 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 ANKRD31Q8N7Z5 1873 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 PDCD6O75340 191 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 HIKESHIQ53FT3 197 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 OCEL1Q9H607 264 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 BCL2L11O43521 198 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 GAB4Q2WGN9 574 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 SPNS3Q6ZMD2 512 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 TIPARPQ7Z3E1 657 aaKnown RBP15.3■□□□□ 0.04
SHANK1-201ENST00000293441 SLC17A5Q9NRA2 495 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 UQCC1Q9NVA1 299 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 A0A1W2PQD3 144 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 ZNF320A2RRD8 509 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 SLC25A5P05141 298 aaKnown RBP15.3■□□□□ 0.04
SHANK1-201ENST00000293441 OR4A8P0C604 315 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 C4orf17Q53FE4 359 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 SIGLECL1Q8N7X8 197 aa15.3■□□□□ 0.04
SHANK1-201ENST00000293441 PTPMT1Q8WUK0 201 aaPredicted RBP15.29■□□□□ 0.04
SHANK1-201ENST00000293441 BCL3P20749 454 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 CD96P40200 585 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 FAM3AP98173 230 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 PSG6Q00889 435 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 STPG1Q5TH74 334 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 KCNK15Q9H427 330 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 A0A1W2PQF6 199 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 CTAG2O75638 210 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 PTP4A1Q93096 173 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 CABLES2Q9BTV7 478 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 CYSLTR2Q9NS75 346 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 COA4Q9NYJ1 87 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 NTMQ9P121 344 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 MPC1Q9Y5U8 109 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 F2RL2O00254 374 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 ADAM10O14672 748 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 DCAF10Q5QP82 559 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 C11orf87Q6NUJ2 197 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 DGAT2L6Q6ZPD8 337 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 ZDHHC22Q8N966 263 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 TMEM208Q9BTX3 173 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 OR1A1Q9P1Q5 309 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 ADRB1P08588 477 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 MESTQ5EB52 335 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 FNDC7Q5VTL7 733 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 UCN2Q96RP3 112 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 SF3B5Q9BWJ5 86 aaKnown RBP15.29■□□□□ 0.04
SHANK1-201ENST00000293441 OR5V1Q9UGF6 321 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 POMT1Q9Y6A1 747 aa15.29■□□□□ 0.04
SHANK1-201ENST00000293441 MPGP29372 298 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 TRAPPC4Q9Y296 219 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 NPTNQ9Y639 398 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 A0A1W2PN81 502 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 CHRNA7P36544 502 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 CRYBB2P43320 205 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 ZNF788Q6ZQV5 615 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 SLC24A4Q8NFF2 622 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 NEIL1Q96FI4 390 aaPredicted RBP15.28■□□□□ 0.04
SHANK1-201ENST00000293441 FLRT3Q9NZU0 649 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 SLC38A11Q08AI6 406 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 OR1L4Q8NGR5 311 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 ZNF260Q3ZCT1 412 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 GLDNQ6ZMI3 551 aaPredicted RBP15.28■□□□□ 0.04
SHANK1-201ENST00000293441 LPAR2Q9HBW0 351 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 AKIP1Q9NQ31 210 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 CACNA1CQ13936 2221 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 MOSPD3O75425 235 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 ATG4DQ86TL0 474 aaPredicted RBP15.28■□□□□ 0.04
SHANK1-201ENST00000293441 LRRC3BQ96PB8 259 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 CACNG5Q9UF02 275 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 TMED3Q9Y3Q3 217 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 ZNF441Q8N8Z8 693 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 C17orf47Q8NEP4 570 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 PECRQ9BY49 303 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 UCK1Q9HA47 277 aa15.28■□□□□ 0.04
SHANK1-201ENST00000293441 MRPS18BQ9Y676 258 aaKnown RBP15.28■□□□□ 0.04
SHANK1-201ENST00000293441 CYR61O00622 381 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 ATXN7O15265 892 aaPredicted RBP15.27■□□□□ 0.04
SHANK1-201ENST00000293441 NTN1O95631 604 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 PNPP00491 289 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 FOXL2P58012 376 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 LYZP61626 148 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms