RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 FAM3CQ92520 227 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 SMDT1Q9H4I9 107 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 AURKAIP1Q9NWT8 199 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 TCFL5Q9UL49 500 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 ARPC3O15145 178 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 NUPR1O60356 82 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 FPR2P25090 351 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 GALNSP34059 522 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 MARCH3Q86UD3 253 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 TMEM52Q8NDY8 209 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 REEP6Q96HR9 211 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 MIEN1Q9BRT3 115 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 GSX1Q9H4S2 264 aaPredicted RBP13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 SRD5A3Q9H8P0 318 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 KIAA1456Q9P272 454 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 AK3Q9UIJ7 227 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 PAM16Q9Y3D7 125 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 CDC14CA4D256 554 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 TRDCB7Z8K6 153 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 FOLR1P15328 257 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 RAB11AP62491 216 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 FAM53BQ14153 422 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 COL5A1-AS1Q5SY13 56 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 FAM90A2PQ658T7 463 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 FIGLAQ6QHK4 219 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 STPG4Q8N801 248 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 OR2G3Q8NGZ4 309 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 FNDC9Q8TBE3 224 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 GPR119Q8TDV5 335 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 RLN3Q8WXF3 142 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 ADOQ96SZ5 270 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF576Q9H609 170 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 FUT9Q9Y231 359 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 OSGIN2Q9Y236 505 aa13.78□□□□□ -0.2
CTDSP1-201ENST00000273062 RAD51DO75771 328 aa13.77□□□□□ -0.2
CTDSP1-201ENST00000273062 MMDQ15546 238 aa13.77□□□□□ -0.2
CTDSP1-201ENST00000273062 CEBPEQ15744 281 aa13.77□□□□□ -0.2
CTDSP1-201ENST00000273062 TM4SF19Q96DZ7 209 aa13.77□□□□□ -0.2
CTDSP1-201ENST00000273062 ALKBH7Q9BT30 221 aaPredicted RBP13.77□□□□□ -0.2
CTDSP1-201ENST00000273062 PILRAQ9UKJ1 303 aa13.77□□□□□ -0.2
CTDSP1-201ENST00000273062 TDRD6O60522 2096 aaKnown RBP13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 LOC101059948A0A1B0GTJ6 334 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 CEACAM18A8MTB9 384 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 HSPB1P04792 205 aaKnown RBP13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 KIR2DS3Q14952 304 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 Q7L0L9 218 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 CLDND2Q8NHS1 167 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 NT5CQ8TCD5 201 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 SLC37A2Q8TED4 501 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 TUBD1Q9UJT1 453 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 MMP17Q9ULZ9 603 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 A0A0A6YYD4 124 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 H0YGG7 62 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 K7EP13 123 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 TRAPPC6AO75865 159 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 VSIG8P0DPA2 414 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 TDGF1P13385 188 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 RAC2P15153 192 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 ATP6V0CP27449 155 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 OR3A2P47893 321 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 ARF3P61204 181 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 DEFB110Q30KQ9 67 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 ZNF506Q5JVG8 444 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 COX15Q7KZN9 410 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 TMEM256Q8N2U0 113 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 LRRC25Q8N386 305 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 FGGYQ96C11 551 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 SLC35E1Q96K37 410 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 GPR35Q9HC97 309 aa13.77□□□□□ -0.21
CTDSP1-201ENST00000273062 LRP4O75096 1905 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 A8MVM7 634 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 NUDT21O43809 227 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 OR10J1P30954 320 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 RPL23AP62750 156 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 MPV17LQ2QL34 196 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 PLAC9Q5JTB6 97 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 SLC25A24Q6NUK1 477 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 TOMM20LQ6UXN7 152 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 LYPD6Q86Y78 171 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 CALHM2Q9HA72 323 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 DAPP1Q9UN19 280 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 RPH3ALQ9UNE2 315 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 KIF26BQ2KJY2 2108 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 TMEM238LA0A1B0GVL6 79 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 TNFRSF10CO14798 259 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 SMIM10L1P0DMW3 83 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 RIPPLY2Q5TAB7 128 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 ADPRHL1Q8NDY3 354 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 NUDT10Q8NFP7 164 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 SMIM10Q96HG1 83 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 TRIM2Q9C040 744 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 HRASLS2Q9NWW9 162 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 RNF24Q9Y225 148 aa13.76□□□□□ -0.21
CTDSP1-201ENST00000273062 TNFSF14O43557 240 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms