RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 RPS10-NUDT3A0A1W2PQS6 291 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 LEUTXA8MZ59 168 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 EEF1E1-BLOC1S5C9J1V9 151 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 WT1P19544 449 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 FUT3P21217 361 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 GLRA1P23415 457 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 GPM6AP51674 278 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 AP2S1P53680 142 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 CYCSP99999 105 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 SLC9A3R2Q15599 337 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 LRRC37A5PQ49AS3 106 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 THAP6Q8TBB0 222 aa11.14□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A10PA6NDY2 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A18PA6NE21 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A16PA6NEW6 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A20PA6NIJ5 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A8PA6NJQ4 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A7PA6NKC0 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 CD300LBA8K4G0 201 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A22PA8MWA6 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A12PA8MX19 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A5PA8MXJ8 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A23PA8MXZ1 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A15PP0C7V4 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A13PP0C7W8 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A14PP0C7W9 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM90A24PP0C7X0 464 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 OR5H8P0DN80 308 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 SERPINF1P36955 418 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 PMELP40967 661 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 HAAOP46952 286 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 TGFBR3Q03167 851 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 TCF15Q12870 199 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF345Q14585 488 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 NHLRC3Q5JS37 347 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 MDP1Q86V88 176 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 SLC30A7Q8NEW0 376 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 Q8NFD4 153 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 OR5A2Q8NGI9 324 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 OR6K3Q8NGY3 331 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 HPSE2Q8WWQ2 592 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 NMES1Q9C002 83 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 RAB18Q9NP72 206 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 CLCF1Q9UBD9 225 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 TNFSF18Q9UNG2 199 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 AUP1Q9Y679 476 aa11.13□□□□□ -0.63
SPTLC1-201ENST00000262554 ANKRD30BLA7E2S9 258 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF891A8MT65 544 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF732B4DXR9 585 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 MSTNO14793 375 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 B3GALNT1O75752 331 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 OR7C1O76099 320 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 OR2F2O95006 317 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 OPRM1P35372 400 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 NPBWR2P48146 333 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 OR2F1Q13607 317 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 DEFB109BQ30KR1 87 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 ELP2Q6IA86 826 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 SLC51BQ86UW2 128 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 MKXQ8IYA7 352 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 DYRK2Q92630 601 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 SLAMF9Q96A28 289 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 TRIB1Q96RU8 372 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF442Q9H7R0 627 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 KIF25Q9UIL4 384 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 PRSS44E7EML9 344 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 AQP7O14520 342 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 TPD52L2O43399 206 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 KNG1P01042 644 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 CTSDP07339 412 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 BCL3P20749 454 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 WNT5AP41221 380 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 PLEKHN1Q494U1 663 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 TMEM211Q6ICI0 200 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 SLC22A25Q6T423 547 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 DHRS11Q6UWP2 260 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 TFAP2EQ6VUC0 442 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 TMEM200AQ86VY9 491 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 CCDC36Q8IYA8 594 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 KCNRGQ8N5I3 272 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 SCARB1Q8WTV0 552 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 PCNPQ8WW12 178 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 DHRS9Q9BPW9 319 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 FGF23Q9GZV9 251 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF286AQ9HBT8 521 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 DECR2Q9NUI1 292 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 MPC1Q9Y5U8 109 aa11.12□□□□□ -0.63
SPTLC1-201ENST00000262554 KANTRA0A1W2PQU2 76 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 TRAPPC2LH3BP13 241 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 J3QW42 95 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 CRHP06850 196 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 PSMB6P28072 239 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 UBE2NP61088 152 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms