RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZNF574Q6ZN55 896 aaPredicted RBP16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 SFTA3P0C7M3 94 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 GYPAP02724 150 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 PSG6Q00889 435 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 ZIC1Q15915 447 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 HIKESHIQ53FT3 197 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 SLC24A4Q8NFF2 622 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 ASB10Q8WXI3 467 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 PRRX2Q99811 253 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 LSM2Q9Y333 95 aaKnown RBP16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 LOC102723971A0A1B0GUV8 181 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 NUDT19A8MXV4 375 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 SMIM17P0DL12 118 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 LINC01387J3KSC0 135 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 CYC1P08574 325 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 PMCHP20382 165 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 MRM2Q9UI43 246 aaKnown RBP16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 IGHV5-10-1A0A0J9YXX1 117 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 TIAL1Q01085 375 aaKnown RBP eCLIP16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 LRRC3BQ96PB8 259 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 ORM2P19652 201 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 AANATQ16613 207 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 MRM1Q6IN84 353 aaKnown RBP16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 ARRDC1Q8N5I2 433 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 WDR31Q8NA23 367 aa16.55■□□□□ 0.24
SMARCC1-201ENST00000254480 NHSL1Q5SYE7 1610 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 SLC25A5P05141 298 aaKnown RBP16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 ZNF141Q15928 474 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 LYPD8Q6UX82 237 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 WDR13Q9H1Z4 485 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 TINAGQ9UJW2 476 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 EXOGQ9Y2C4 368 aaKnown RBP16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 SLC38A11Q08AI6 406 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 DYRK2Q92630 601 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 MSL2Q9HCI7 577 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 GAR1Q9NY12 217 aaKnown RBP16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 XKRY2A2RUG3 117 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 NDUFB6O95139 128 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 DGAT2L6Q6ZPD8 337 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 UQCC1Q9NVA1 299 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 IGHV3OR15-7A0A075B7D8 119 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 CDC20Q12834 499 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 BHLHA15Q7RTS1 189 aaPredicted RBP16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 Q8IYB0 196 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 C10orf111Q8N326 155 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 C1QCP02747 245 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 CMTM3Q96MX0 182 aa16.54■□□□□ 0.24
SMARCC1-201ENST00000254480 CDIPTO14735 213 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 ADAP1O75689 374 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 ACSM4P0C7M7 580 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 BCL3P20749 454 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 FOXO1Q12778 655 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 FNDC7Q5VTL7 733 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 WDR34Q96EX3 536 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 RP1P56715 2156 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 C9orf170A2RU37 121 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 ZNF425Q6IV72 752 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 LINC00299Q6ZSB3 139 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 ZNF429Q86V71 674 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 HTN1P15515 57 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 TNXAQ16473 311 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 GGNBP1Q5YKI7 109 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 TMEM56Q96MV1 263 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 DTX4Q9Y2E6 619 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 IGHA1P01876 353 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 IGHA2P01877 340 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 TEX261Q6UWH6 196 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 MOGAT3Q86VF5 341 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 OR2Y1Q8NGV0 311 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 U3KQ87 197 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 FFAR1O14842 300 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 SOCS1O15524 211 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 GAL3ST2Q9H3Q3 398 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 AAMDCQ9H7C9 122 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 RASL12Q9NYN1 266 aa16.53■□□□□ 0.24
SMARCC1-201ENST00000254480 LRRC3CA6NJW4 275 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 RNASEK-C17orf49H0YIS7 233 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 UQCC2Q9BRT2 126 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 A0A1W2PNV4 684 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 F5H697 171 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 GEMIN2O14893 280 aaKnown RBP16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 LYZP61626 148 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 COMMD1Q8N668 190 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 TMEM52Q8NDY8 209 aa16.52■□□□□ 0.24
SMARCC1-201ENST00000254480 B3GALNT1O75752 331 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 HRASP01112 189 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 RHOBP62745 196 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 PAX5Q02548 391 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 BCL2L2Q92843 193 aaPredicted RBP16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 NQO2P16083 231 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 PTTG1IPP53801 180 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 TMEM37Q8WXS4 190 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 ABHD1Q96SE0 405 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 TMEM147Q9BVK8 224 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 FRRS1LQ9P0K9 344 aa16.52■□□□□ 0.23
SMARCC1-201ENST00000254480 CYR61O00622 381 aa16.51■□□□□ 0.23
SMARCC1-201ENST00000254480 PDCD6O75340 191 aa16.51■□□□□ 0.23
SMARCC1-201ENST00000254480 SFT2D2O95562 160 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms