RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 TEX50A0A1B0GTY4 177 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 PYCARD-AS1I3L0S3 204 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 APELAP0DMC3 54 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL1A1-201ENST00000225964 ZNF429Q86V71 674 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 LURAP1Q96LR2 239 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 LANCL1O43813 399 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 NKX2-2O95096 273 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 MPZL1O95297 269 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 OR5AL1P0C617 328 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 BCL3P20749 454 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 HTR1DP28221 377 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 MGPP08493 103 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 CISD3P0C7P0 127 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 SMIM18P0DKX4 95 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
COL1A1-201ENST00000225964 SLC37A1P57057 533 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 RPEL1Q2QD12 228 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 ASCL5Q7RTU5 278 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 BAP18Q8IXM2 172 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 ZNF683Q8IZ20 524 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 ZNF441Q8N8Z8 693 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 RNF2Q99496 336 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 ZMIZ1Q9ULJ6 1067 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 SBK3P0C264 359 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 ZNF141Q15928 474 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 FAHD1Q6P587 224 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 GPR137Q96N19 417 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 HSBP1O75506 76 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 EML2O95834 649 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 SFTPCP11686 197 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 FABP4P15090 132 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 AVPR2P30518 371 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 NKG7Q16617 165 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 PRSS3P2Q8NHM4 247 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 ASB10Q8WXI3 467 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 ARG1P05089 322 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 NAAAQ02083 359 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 KIAA1958Q8N8K9 716 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 UQCC2Q9BRT2 126 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 TRIM77I1YAP6 450 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 BMPR1BO00238 502 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 IGHA1P01876 353 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 IGHA2P01877 340 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 MMP15P51511 669 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 RPL30P62888 115 aaKnown RBP11.75□□□□□ -0.53
COL1A1-201ENST00000225964 ZNF596Q8TC21 504 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 AP5S1Q9NUS5 200 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 RD3LP0DJH9 198 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 ID4P47928 161 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 CCL4P13236 92 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 ETV3LQ6ZN32 361 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 YIPF6Q96EC8 236 aa11.75□□□□□ -0.53
COL1A1-201ENST00000225964 TGOLN2O43493 480 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 ECSCRQ19T08 205 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 CROCCQ5TZA2 2017 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 J3QR89 54 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 GNG7O60262 68 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 SKP2Q13309 424 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 MIDNQ504T8 468 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 SLC16A12Q6ZSM3 486 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 GTF2H5Q6ZYL4 71 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 LINC01555Q8NAE3 123 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 TMEM171Q8WVE6 324 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 MS4A7Q9GZW8 240 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-201ENST00000225964 OOEPA6NGQ2 149 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 ICMTO60725 284 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 HAND1O96004 215 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 ACTL6AO96019 429 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 ORM1P02763 201 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 FAM219BQ5XKK7 198 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 C10orf90Q96M02 699 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 SIGLEC7Q9Y286 467 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 FUCA1P04066 466 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 HOXC4P09017 264 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-201ENST00000225964 SFTA3P0C7M3 94 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-201ENST00000225964 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 MSL2Q9HCI7 577 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 PARD6AQ9NPB6 346 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 MED30Q96HR3 178 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 RABAC1Q9UI14 185 aa11.74□□□□□ -0.53
COL1A1-201ENST00000225964 ZNF737O75373 536 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 MRPS11P82912 194 aaKnown RBP11.73□□□□□ -0.53
COL1A1-201ENST00000225964 SIGLEC14Q08ET2 396 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 OR4S2Q8NH73 311 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 GABRG3Q99928 467 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 PCGF1Q9BSM1 259 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 SDK1Q7Z5N4 2213 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 OR2T8A6NH00 312 aa11.73□□□□□ -0.53
COL1A1-201ENST00000225964 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
COL1A1-201ENST00000225964 CADM3Q8N126 398 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms