RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SDCBPO00560 298 aaPredicted RBP17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 SS18L1O75177 396 aaPredicted RBP17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 RPA2P15927 270 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 CCL11P51671 97 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 TOR2AQ5JU69 321 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 OSR2Q8N2R0 312 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 FDCSPQ8NFU4 85 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 OR56B2PQ8NGI1 322 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 CASTOR1Q8WTX7 329 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 C12orf49Q9H741 205 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 PCDHB16Q9NRJ7 776 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 EDARQ9UNE0 448 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 ZNF175Q9Y473 711 aa17.03■□□□□ 0.32
PCDHB11-202ENST00000624887 CCSO14618 274 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 CHATP28329 748 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 MPGP29372 298 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 PLP2Q04941 152 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 MALLQ13021 153 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 HLXQ14774 488 aaPredicted RBP17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 FBXW9Q5XUX1 488 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 C3P1Q6ZMU1 363 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 DPPA2Q7Z7J5 298 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 TMEM230Q96A57 120 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 FAAP24Q9BTP7 215 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 PDCD10Q9BUL8 212 aa17.02■□□□□ 0.32
PCDHB11-202ENST00000624887 RPS10-NUDT3A0A1W2PQS6 291 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 DBX1A6NMT0 343 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 RRP8O43159 456 aaKnown RBP17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 IL18BPO95998 194 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 SFTPBP07988 381 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 PMP22Q01453 160 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 CLLU1Q5K131 121 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 NSUN5P2Q63ZY6 315 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 IGFL2Q6UWQ7 119 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 SLC38A6Q8IZM9 456 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 FBXL14Q8N1E6 418 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 ZSCAN4Q8NAM6 433 aaPredicted RBP17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 OR1K1Q8NGR3 316 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 OR51F2Q8NH61 342 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 HDHD3Q9BSH5 251 aaPredicted RBP17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 ARL6Q9H0F7 186 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 DLL3Q9NYJ7 618 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNF581Q9P0T4 197 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 AK3Q9UIJ7 227 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 GPR160Q9UJ42 338 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 DMXL1Q9Y485 3027 aa17.02■□□□□ 0.31
PCDHB11-202ENST00000624887 MUC6Q6W4X9 2439 aa17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 IGKV1D-8A0A087WSZ0 117 aa17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 MSTNO14793 375 aa17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 GEMIN2O14893 280 aaKnown RBP17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 PIGYQ3MUY2 71 aa17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 TMEM65Q6PI78 240 aa17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 MRPL21Q7Z2W9 205 aaKnown RBP17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 CALHM1Q8IU99 346 aa17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 RTBDNQ9BSG5 229 aaPredicted RBP17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 PAPOLGQ9BWT3 736 aaKnown RBP17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 MFFQ9GZY8 342 aa17.01■□□□□ 0.31
PCDHB11-202ENST00000624887 WT1P19544 449 aaPredicted RBP17■□□□□ 0.31
PCDHB11-202ENST00000624887 DTYMKP23919 212 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 SURF2Q15527 256 aaPredicted RBP17■□□□□ 0.31
PCDHB11-202ENST00000624887 NAXEQ8NCW5 288 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 OR10AD1Q8NGE0 317 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 SEC22AQ96IW7 307 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 SULT4A1Q9BR01 284 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 ST3GAL6Q9Y274 331 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 STARD10Q9Y365 291 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 PQLC2LA1A4F0 135 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNHIT1O43257 154 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 RP2O75695 350 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 SFT2D2O95562 160 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 CST4P01036 141 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 IGHG3P01860 377 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 PRDX4Q13162 271 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 KCTD9Q7L273 389 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNF546Q86UE3 836 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNF611Q8N823 705 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 BCL2L2Q92843 193 aaPredicted RBP17■□□□□ 0.31
PCDHB11-202ENST00000624887 POM121Q96HA1 1249 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 CMSS1Q9BQ75 279 aaKnown RBP17■□□□□ 0.31
PCDHB11-202ENST00000624887 OPA3Q9H6K4 179 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 COMMD9Q9P000 198 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 ANXA10Q9UJ72 324 aa17■□□□□ 0.31
PCDHB11-202ENST00000624887 NGFP01138 241 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 SLC25A4P12235 298 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 BAMBIQ13145 260 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 CLN3Q13286 438 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 HIKESHIQ53FT3 197 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 C11orf87Q6NUJ2 197 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 Q8NFD4 153 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 WBP1Q96G27 269 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 GMPPAQ96IJ6 420 aaPredicted RBP16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 GSX2Q9BZM3 304 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 PTPRBP23467 1997 aa16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 TNRC6AQ8NDV7 1962 aaKnown RBP16.99■□□□□ 0.31
PCDHB11-202ENST00000624887 A0A0B4J2A0 478 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 PDGFAP04085 211 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 PI3P19957 117 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 ECI1P42126 302 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 RBM11P57052 281 aaKnown RBP16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 CEACAM21Q3KPI0 293 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms