RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 PFN2P35080 140 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 CMC4P56277 68 aaPredicted RBP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 BASP1P80723 227 aaKnown RBP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 SLAMF1Q13291 335 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 BTN1A1Q13410 526 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 RPEL1Q2QD12 228 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 TRMT5Q32P41 509 aaKnown RBP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 NDUFAF6Q330K2 333 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 C12orf54Q6X4T0 127 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 TPGS1Q6ZTW0 290 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 LRRC6Q86X45 466 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 APRG1Q8IVJ8 170 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 SYS1Q8N2H4 156 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 SLC26A10Q8NG04 563 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 ENKURQ8TC29 256 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 ING5Q8WYH8 240 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 GHSRQ92847 366 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 PKMYT1Q99640 499 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 PARD6GQ9BYG4 376 aaPredicted RBP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 POTEKPQ9BYX7 375 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 CHRNA10Q9GZZ6 450 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 DRC3Q9H069 523 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 TMEM38AQ9H6F2 299 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 KIR3DX1Q9H7L2 352 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 RRAGDQ9NQL2 400 aaPredicted RBP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 PSMD13Q9UNM6 376 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 HES2Q9Y543 173 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 PUS1Q9Y606 427 aaKnown RBP eCLIP1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 V9GYY9 64 aa1.97□□□□□ -2.09
SCAMP1-205ENST00000614488 OTOGLQ3ZCN5 2332 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 GOLGA6L4A6NEF3 574 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 TVP23AA6NH52 213 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 SLC22A20A6NK97 555 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 RNASEK-C17orf49H0YIS7 233 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 MKRN2OSH3BPM6 223 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 K7EN84 100 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 M0QXV9 152 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 PSIP1O75475 530 aaKnown RBP1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 PLEKHA8P1O95397 391 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 KLK1P06870 262 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 ZNF35P13682 527 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 CSNK2A2P19784 350 aaPredicted RBP1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 RAB4AP20338 218 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 TEAD1P28347 426 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 P2RY2P41231 377 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 CSKP41240 450 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 MAGEA6P43360 314 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 NDUFA8P51970 172 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 ELF3P78545 371 aaPredicted RBP1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 TNFRSF9Q07011 255 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 BCL2A1Q16548 175 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 TMEM69Q5SWH9 247 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 FAM173BQ6P4H8 233 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 CD300LGQ6UXG3 332 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 LINC00336Q6ZUF6 198 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 PAGE2Q7Z2X7 111 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 KIF2BQ8N4N8 673 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 CDRT4Q8N9R6 151 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 UBAC2Q8NBM4 344 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 OR8J2Q8NGG1 315 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 TMEM239Q8WW34 195 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 CDKL2Q92772 493 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 RPEQ96AT9 228 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 ZNF75AQ96N20 296 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 C18orf15Q96N68 181 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 SERPINB11Q96P15 392 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 SHCBP1LQ9BZQ2 653 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 ZYG11BQ9C0D3 744 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 SRRQ9GZT4 340 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 LRRC19Q9H756 370 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 ZNF442Q9H7R0 627 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 RCL1Q9Y2P8 373 aaKnown RBP1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 LRPPRCP42704 1394 aaKnown RBP1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 JCADQ9P266 1359 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 KIAA1671Q9BY89 1806 aa1.96□□□□□ -2.1
SCAMP1-205ENST00000614488 MROH7Q68CQ1 1323 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 A0A1W2PRF3 423 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 A0A1W2PRM7 423 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 CENPBD1B2RD01 187 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 KLRC4-KLRK1H3BQV0 150 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 TRAPPC3O43617 180 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 ENSAO43768 121 aaKnown RBP1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 MPDU1O75352 247 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 TNFAIP8O95379 198 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 TDP2O95551 362 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 LDOC1O95751 146 aaPredicted RBP1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 FADS2O95864 444 aaKnown RBP1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 OXTP01178 125 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 GP1BAP07359 652 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 CD28P10747 220 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 NELFEP18615 380 aaKnown RBP1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 BGNP21810 368 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 IVDP26440 423 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 HOXA6P31267 233 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 PCK1P35558 622 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 RFC3P40938 356 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 PPP1R2P41236 205 aa1.95□□□□□ -2.1
SCAMP1-205ENST00000614488 SERPINB8P50452 374 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms