RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TMEM164Q5U3C3 297 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 ROBO4Q8WZ75 1007 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 GBF1Q92538 1859 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 TRAV14DV4A0A0A6YYC5 116 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 E9PQ18 207 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 MBP02144 154 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 SSR4P51571 173 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 TSPO2Q5TGU0 170 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 ZNF574Q6ZN55 896 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 ZNF707Q96C28 371 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 PACRGQ96M98 296 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 UTP23Q9BRU9 249 aaKnown RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 SIRT7Q9NRC8 400 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 MCTS1Q9ULC4 181 aaKnown RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 KITLGP21583 273 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 POLR2GP62487 172 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS36-207ENST00000611132 DHRS11Q6UWP2 260 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 LIAT1Q6ZQX7 453 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 AQP3Q92482 292 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 PINX1Q96BK5 328 aaKnown RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 MEGF10Q96KG7 1140 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 GAS2L1Q99501 681 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 ACTR3CQ9C0K3 210 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 UCK1Q9HA47 277 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 SLC2A8Q9NY64 477 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 TIMM10BQ9Y5J6 103 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 MGAMO43451 1857 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 ADAM20O43506 726 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 ACTL6AO96019 429 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 OPN1MWP04001 364 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 OPN1MW2P0DN77 364 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 OPN1MW3P0DN78 364 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 HFEQ30201 348 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 FHL5Q5TD97 284 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 DBX2Q6ZNG2 339 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 C3orf85A0A1B0GTC6 90 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 RNF222A6NCQ9 220 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 HSBP1L1C9JCN9 74 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 WDR1O75083 606 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 PTBP3O95758 552 aaKnown RBP12.96□□□□□ -0.33
VPS36-207ENST00000611132 UBE2V2Q15819 145 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 SMDT1Q9H4I9 107 aa12.96□□□□□ -0.33
VPS36-207ENST00000611132 HS3ST1O14792 307 aa12.96□□□□□ -0.34
VPS36-207ENST00000611132 SPINT1O43278 529 aa12.96□□□□□ -0.34
VPS36-207ENST00000611132 GPBAR1Q8TDU6 330 aa12.96□□□□□ -0.34
VPS36-207ENST00000611132 RDH5Q92781 318 aa12.96□□□□□ -0.34
VPS36-207ENST00000611132 LRRC3BQ96PB8 259 aa12.96□□□□□ -0.34
VPS36-207ENST00000611132 PILRAQ9UKJ1 303 aa12.96□□□□□ -0.34
VPS36-207ENST00000611132 XKRY2A2RUG3 117 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 ZNF814B7Z6K7 855 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 FOLR3P41439 243 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 VEGFBP49765 207 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 CCR5P51681 352 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 CD81P60033 236 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 PKIAP61925 76 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 PCOLCE2Q9UKZ9 415 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 MMP17Q9ULZ9 603 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 AUP1Q9Y679 476 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 V9GYS6 101 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 ZNF320A2RRD8 509 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 LILRA5A6NI73 299 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 DUSP3P51452 185 aaPredicted RBP12.95□□□□□ -0.34
VPS36-207ENST00000611132 FUT6P51993 359 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 ACOT6Q3I5F7 207 aaPredicted RBP12.95□□□□□ -0.34
VPS36-207ENST00000611132 SNX22Q96L94 193 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 A0A1W2PQD3 144 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 METTL12A8MUP2 240 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 TTRP02766 147 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 POC1BQ8TC44 478 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 MRPL38Q96DV4 380 aaKnown RBP12.95□□□□□ -0.34
VPS36-207ENST00000611132 FOXQ1Q9C009 403 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 NOSIPQ9Y314 301 aaKnown RBP12.95□□□□□ -0.34
VPS36-207ENST00000611132 TRBV23-1A0A0A0MS06 115 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 OR5H15A6NDH6 313 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 OR5H1A6NKK0 313 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 B4DEV8 164 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 COX5AP20674 150 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 TMEM241Q24JQ0 296 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 BHLHE23Q8NDY6 225 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 ZNRF4Q8WWF5 429 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 EXTL1Q92935 676 aa12.95□□□□□ -0.34
VPS36-207ENST00000611132 METTL1Q9UBP6 276 aaKnown RBP12.95□□□□□ -0.34
VPS36-207ENST00000611132 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
VPS36-207ENST00000611132 FDX2Q6P4F2 183 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 LYZL2Q7Z4W2 148 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 OR10C1Q96KK4 312 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 GPR87Q9BY21 358 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 PPP1R3CQ9UQK1 317 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 MYLKQ15746 1914 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 OTOL1A6NHN0 477 aaPredicted RBP12.94□□□□□ -0.34
VPS36-207ENST00000611132 CD27P26842 260 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 PDCD1Q15116 288 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 OR10P1Q8NGE3 313 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 PPP1R35Q8TAP8 253 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 BORCS7Q96B45 105 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 LPAR5Q9H1C0 372 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 ZNF816-ZNF321PA0A0X1KG74 233 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 G3V3Q6 166 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 DEGS1O15121 323 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms