RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 Q6ZSR3 168 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 ELMOD2Q8IZ81 293 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 BBS1Q8NFJ9 593 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 CNN2Q99439 309 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 TVP23BQ9NYZ1 205 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 IKZF2Q9UKS7 526 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 SLC7A11Q9UPY5 501 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 SNX5Q9Y5X3 404 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 V9GYS6 101 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 PLXNB1O43157 2135 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 LOC110117498-PIK3R3F6TDL0 507 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 FAM107AO95990 144 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 TTRP02766 147 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 ZNF728P0DKX0 622 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 CRISP1P54107 249 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 OR12D2P58182 307 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 ERVK11-1P61568 191 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 MINOS1Q5TGZ0 78 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 ZBTB49Q6ZSB9 765 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 TMEM179BQ7Z7N9 219 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 OR4M1Q8NGD0 313 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 SERTAD4Q9NUC0 356 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 NECAP2Q9NVZ3 263 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 R4GMQ9 66 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 MINOS1-NBL1R4GNA1 71 aa14.41□□□□□ -0.1
SHKBP1-227ENST00000602011 MEGF11A6BM72 1044 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 A6NDX4 124 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 PIN1P1O15428 100 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 SYNGR1O43759 233 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 CHST1O43916 411 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 ARG1P05089 322 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 COX7A1P24310 79 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 AZGP1P25311 298 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 BMXP51813 675 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 ESRRGP62508 458 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 BCL2L15Q5TBC7 163 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 ZNF626Q68DY1 528 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 ZNF322Q6U7Q0 402 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 ASRGL1Q7L266 308 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 MEPCEQ7L2J0 689 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 GDPD3Q7L5L3 318 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 OR14K1Q8NGZ2 314 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 CCDC124Q96CT7 223 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 NKX3-1Q99801 234 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 ZNF702PQ9H963 129 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 PAPOLBQ9NRJ5 636 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 TAS2R1Q9NYW7 299 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 OR52A1Q9UKL2 312 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 SLC22A13Q9Y226 551 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 DNAH3Q8TD57 4116 aa14.4□□□□□ -0.1
SHKBP1-227ENST00000602011 hADV38S2A0JD32 116 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 ODF3BA8MYP8 253 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 PSMD9O00233 223 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 SERPINA3P01011 423 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 CCL3L1P16619 93 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 PRKACGP22612 351 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 DLX6P56179 175 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 LOXL3P58215 753 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 TMEM236Q5W0B7 351 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 ENTHD1Q8IYW4 607 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 LYG1Q8N1E2 194 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 C10orf35Q96D05 121 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 SNX22Q96L94 193 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 ZNF488Q96MN9 340 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 THTPAQ9BU02 230 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 WNT10AQ9GZT5 417 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 OR14J1Q9UGF5 321 aa14.39□□□□□ -0.11
SHKBP1-227ENST00000602011 KMT2CQ8NEZ4 4911 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 CCDC182A6NF36 153 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 ZNF670-ZNF695F2Z2N8 137 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 SRSF10O75494 262 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 MRPL3P09001 348 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 T-ENOLP0DO92 83 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 IGHV1-8P0DP01 117 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 CCL1P22362 96 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 FUT6P51993 359 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 CXCR4P61073 352 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 IL18R1Q13478 541 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 ZNF273Q14593 569 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 PTGES3Q15185 160 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 SSX2Q16385 188 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 SLX4IPQ5VYV7 408 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 NXNL2Q5VZ03 156 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 C16orf82Q7Z2V1 217 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 LHFPL4Q7Z7J7 247 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 Q8IYB0 196 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 ASCC1Q8N9N2 400 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 CCDC197Q8NCU1 140 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 WFDC9Q8NEX5 89 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 WIPF2Q8TF74 440 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 R3HDM4Q96D70 268 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 AKR1E2Q96JD6 320 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 GPR173Q9NS66 373 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 CLN6Q9NWW5 311 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 GTF2A1LQ9UNN4 478 aa14.38□□□□□ -0.11
SHKBP1-227ENST00000602011 A0A1B0GTI1 187 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 ZNF737O75373 536 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 GATBO75879 557 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 DNAJC8O75937 253 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms