RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 OR56B2PQ8NGI1 322 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 SLC25A43Q8WUT9 341 aaPredicted RBP9.3□□□□□ -0.92
USB1-212ENST00000566082 HIST1H2BAQ96A08 127 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 MRGPRX4Q96LA9 322 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 LAMP3Q9UQV4 416 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 SCN8AQ9UQD0 1980 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 A0A1W2PPQ1 181 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 RBFOX3A6NFN3 312 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 DHHO43323 396 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 THBS4P35443 961 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 NHLH2Q02577 135 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 ZNF813Q6ZN06 617 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 PPP1R3BQ86XI6 285 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 RDH5Q92781 318 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 LHX4Q969G2 390 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 PATZ1Q9HBE1 687 aaKnown RBP9.3□□□□□ -0.92
USB1-212ENST00000566082 SLCO1B1Q9Y6L6 691 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
USB1-212ENST00000566082 SVILO95425 2214 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 G3V3Q6 166 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 HS3ST1O14792 307 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 EIF1BO60739 113 aaKnown RBP9.3□□□□□ -0.92
USB1-212ENST00000566082 C9orf40Q8IXQ3 194 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 ZNF100Q8IYN0 542 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 ZNF383Q8NA42 475 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 OR10G3Q8NGC4 313 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 OR1L3Q8NH93 324 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 ADAMTS17Q8TE56 1095 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 INTS12Q96CB8 462 aaKnown RBP9.3□□□□□ -0.92
USB1-212ENST00000566082 SMIM7Q9BQ49 75 aa9.3□□□□□ -0.92
USB1-212ENST00000566082 PIGBOS1A0A0B4J2F0 54 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 A0A1W2PQF6 199 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 TGFBR3LH3BV60 316 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 YKT6O15498 198 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 DXOO77932 396 aaKnown RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 SYNGR4O95473 234 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 CTSDP07339 412 aaPredicted RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 RAC2P15153 192 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 FBXO46Q6PJ61 603 aaPredicted RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 OSR2Q8N2R0 312 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 DYRK2Q92630 601 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 PLEKHF2Q9H8W4 249 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 IGHV3-64DA0A0J9YX35 117 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 HMGB3O15347 200 aaKnown RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 TUSC2O75896 110 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 DHRS3O75911 302 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 EFEMP2O95967 443 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 HOXC4P09017 264 aaPredicted RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 B4GALT1P15291 398 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 MST1P26927 711 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 UNC119Q13432 240 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 VAX1Q5SQQ9 334 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 LINC00114Q6XXX2 140 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 ZNF705AQ6ZN79 300 aaPredicted RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 AQP10Q96PS8 301 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 ALKBH3Q96Q83 286 aaPredicted RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 KCNIP1Q9NZI2 227 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 PQLC2LA1A4F0 135 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 NPIPB9F8W1W9 429 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 WDR1O75083 606 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 PATE4P0C8F1 98 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 FOSL1P15407 271 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 RAB30Q15771 203 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 PTCRAQ6ISU1 281 aaPredicted RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 ADAM19Q9H013 955 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 TRAPPC2LQ9UL33 140 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 WASF3Q9UPY6 502 aa9.29□□□□□ -0.92
USB1-212ENST00000566082 CARHSP1Q9Y2V2 147 aaKnown RBP9.29□□□□□ -0.92
USB1-212ENST00000566082 A0A1B0GTI1 187 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 A0A1W2PPV4 95 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 H3BQ15 152 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 ADAM20O43506 726 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 EDN3P14138 238 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 HOXC12P31275 282 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 MLF1P58340 268 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 PCBD1P61457 104 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 TMEM41BQ5BJD5 291 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 TEX30Q5JUR7 227 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 YRDCQ86U90 279 aaKnown RBP9.28□□□□□ -0.92
USB1-212ENST00000566082 SAMD10Q9BYL1 202 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 TMED3Q9Y3Q3 217 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 HKR1P10072 659 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 BAXQ07812 192 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 KCNIP4Q6PIL6 250 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 FIP1L1Q6UN15 594 aaKnown RBP9.28□□□□□ -0.92
USB1-212ENST00000566082 UBALD1Q8TB05 177 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 MEGF10Q96KG7 1140 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 SNX22Q96L94 193 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 DMRTA2Q96SC8 542 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 GABRG3Q99928 467 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 OR51M1Q9H341 326 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 SLC2A9Q9NRM0 540 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 SLC2A8Q9NY64 477 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 ANKRD30BLA7E2S9 258 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 CD63P08962 238 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 MDKP21741 143 aaPredicted RBP9.28□□□□□ -0.92
USB1-212ENST00000566082 CD27P26842 260 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 GDF1P27539 372 aa9.28□□□□□ -0.92
USB1-212ENST00000566082 PSMB3P49720 205 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms