RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GPM6AP51674 278 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 BAMBIQ13145 260 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 ARL6IP1Q15041 203 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 GUSBP1Q15486 140 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 GRK1Q15835 563 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 AADACL3Q5VUY0 350 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 ZNF767PQ75MW2 155 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 LHFPL1Q86WI0 220 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 C9orf106Q8NAJ2 232 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 OR5AP2Q8NGF4 316 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 DPCDQ9BVM2 203 aaPredicted RBP16.45■□□□□ 0.22
SMPD3-203ENST00000563226 C5orf66Q9H5L9 145 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 TMEM165Q9HC07 324 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 ST3GAL6Q9Y274 331 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 LYZL6O75951 148 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 VAMP1P23763 118 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 TAS2R46P59540 309 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 IL13RA1P78552 427 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 TEX261Q6UWH6 196 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 FAM214BQ7L5A3 538 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 ZDHHC23Q8IYP9 409 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 SLC30A7Q8NEW0 376 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 OR5M8Q8NGP6 311 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 CASTOR1Q8WTX7 329 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 NANOS1Q8WY41 292 aaKnown RBP16.44■□□□□ 0.22
SMPD3-203ENST00000563226 TMEM230Q96A57 120 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 TMPRSS13Q9BYE2 586 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 HSF4Q9ULV5 492 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 GPR132Q9UNW8 380 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 OSGIN2Q9Y236 505 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 U3KQ87 197 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 CD300LBA8K4G0 201 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 ERVH48-1M5A8F1 160 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 CST4P01036 141 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 PPA1Q15181 289 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 TSC22D1Q15714 1073 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 OVCH2Q7RTZ1 564 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 MITD1Q8WV92 249 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 PPA2Q9H2U2 334 aa16.44■□□□□ 0.22
SMPD3-203ENST00000563226 CEACAM18A8MTB9 384 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 RBM11P57052 281 aaKnown RBP16.43■□□□□ 0.22
SMPD3-203ENST00000563226 SORDQ00796 357 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 CHRFAM7AQ494W8 412 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 SPATA46Q5T0L3 261 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 RTL6Q6ICC9 239 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 VWA1Q6PCB0 445 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 DPPA2Q7Z7J5 298 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 CNEP1R1Q8N9A8 125 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 ZSCAN4Q8NAM6 433 aaPredicted RBP16.43■□□□□ 0.22
SMPD3-203ENST00000563226 SLAMF9Q96A28 289 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 HS3ST6Q96QI5 342 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 GLRX2Q9NS18 164 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 ESPL1Q14674 2120 aa16.43■□□□□ 0.22
SMPD3-203ENST00000563226 FXYD6-FXYD2A0A087WZ82 144 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 TRAV14DV4A0A0A6YYC5 116 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 FAM221AA4D161 298 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 OR5H14A6NHG9 310 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 MCRIP1C9JLW8 97 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 F8VVB4 439 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 F8VWA3 439 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 NOS1APO75052 506 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 BCL3P20749 454 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 NFYAP23511 347 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 OPRM1P35372 400 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 HAAOP46952 286 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 CEACAM21Q3KPI0 293 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 FAHD2BQ6P2I3 314 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 ASCL5Q7RTU5 278 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 PEG10Q86TG7 708 aaKnown RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 ZNF680Q8NEM1 530 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 FAHD2AQ96GK7 314 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 PRRX2Q99811 253 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 CMSS1Q9BQ75 279 aaKnown RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 FXYD6Q9H0Q3 95 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 PLSCR2Q9NRY7 297 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 MGAQ8IWI9 3026 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 ZNF732B4DXR9 585 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 ARPC5O15511 151 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 PPP3CBP16298 524 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 ZNF14P17017 642 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 FPR2P25090 351 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 KIR2DL2P43627 348 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 SEC61A1P61619 476 aaKnown RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 MRPS24Q96EL2 167 aaKnown RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 RTBDNQ9BSG5 229 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-203ENST00000563226 SVILO95425 2214 aa16.42■□□□□ 0.22
SMPD3-203ENST00000563226 L7N2F9 121 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 RGS11O94810 467 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 CFDP00746 253 aaPredicted RBP16.41■□□□□ 0.22
SMPD3-203ENST00000563226 PDGFAP04085 211 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 FCGR3AP08637 254 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 ZNF169Q14929 603 aaPredicted RBP16.41■□□□□ 0.22
SMPD3-203ENST00000563226 IGFBP7Q16270 282 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 ZADH2Q8N4Q0 377 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 SARAFQ96BY9 339 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 FOXF2Q12947 444 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 OPCMLQ14982 345 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 OR2T2Q6IF00 324 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 Q6ZPA2 131 aa16.41■□□□□ 0.22
SMPD3-203ENST00000563226 KCTD9Q7L273 389 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms