RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 WBP1Q96G27 269 aa8.11□□□□□ -1.11
LINC00838-201ENST00000562956 ABHD17AQ96GS6 310 aa8.11□□□□□ -1.11
LINC00838-201ENST00000562956 SLC6A7Q99884 636 aa8.11□□□□□ -1.11
LINC00838-201ENST00000562956 METTL9Q9H1A3 318 aa8.11□□□□□ -1.11
LINC00838-201ENST00000562956 RANBP3Q9H6Z4 567 aaPredicted RBP8.11□□□□□ -1.11
LINC00838-201ENST00000562956 SLC7A11Q9UPY5 501 aa8.11□□□□□ -1.11
LINC00838-201ENST00000562956 BSNQ9UPA5 3926 aa8.11□□□□□ -1.11
LINC00838-201ENST00000562956 MKRN2OSH3BPM6 223 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 BET1O15155 118 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 PRAF2O60831 178 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 TNFSF13O75888 250 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 HTR3BO95264 441 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 VSIG10L2P0DP72 767 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 GABRR1P24046 479 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 ATP1B3P54709 279 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 PRDX4Q13162 271 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 FAM189A2Q15884 450 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 OR2A2Q6IF42 318 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 ASCL4Q6XD76 172 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 GLDNQ6ZMI3 551 aaPredicted RBP8.1□□□□□ -1.11
LINC00838-201ENST00000562956 CD163Q86VB7 1156 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 CALHM1Q8IU99 346 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 CPNE2Q96FN4 548 aaPredicted RBP8.1□□□□□ -1.11
LINC00838-201ENST00000562956 Q96M66 194 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 GSX2Q9BZM3 304 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 FGF23Q9GZV9 251 aaPredicted RBP8.1□□□□□ -1.11
LINC00838-201ENST00000562956 ZNF581Q9P0T4 197 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 MAB21L2Q9Y586 359 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 ATMQ13315 3056 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 MED12LQ86YW9 2145 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 ARHGAP21Q5T5U3 1957 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 hCG_1807616A0A1W2PRN6 198 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 B3GALNT1O75752 331 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 RLN1P04808 185 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 CPT2P23786 658 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 HRH1P35367 487 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 UBE2NP61088 152 aaKnown RBP8.1□□□□□ -1.11
LINC00838-201ENST00000562956 TSPAN5P62079 268 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 PDZK1IP1Q13113 114 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 METTL11BQ5VVY1 283 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 RTL6Q6ICC9 239 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 BPIFB2Q8N4F0 458 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 BHLHE23Q8NDY6 225 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 TECTBQ96PL2 329 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 PECRQ9BY49 303 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 CHST6Q9GZX3 395 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 AUP1Q9Y679 476 aa8.1□□□□□ -1.11
LINC00838-201ENST00000562956 LILRA1O75019 489 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 CNOT4O95628 575 aaKnown RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 CSTBP04080 98 aaKnown RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 COX5AP20674 150 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 CBX5P45973 191 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 IDH3GP51553 393 aaPredicted RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 SCGB2B2Q4G0G5 96 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 SPATA46Q5T0L3 261 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 RPUSD3Q6P087 351 aaKnown RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 SLC36A1Q7Z2H8 476 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 RPRMLQ8N4K4 120 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 OR52B4Q8NGK2 314 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 HPSE2Q8WWQ2 592 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 STARD4Q96DR4 205 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 PLSCR4Q9NRQ2 329 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 TP53TG5Q9Y2B4 290 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 CEP295Q9C0D2 2601 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 ANKRD11Q6UB99 2663 aaPredicted RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 PQLC2LA1A4F0 135 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 MBD3L4A6NDZ8 208 aaPredicted RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 MBD3L3A6NE82 208 aaPredicted RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 MBD3L5A6NJ08 208 aaPredicted RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 CD300LBA8K4G0 201 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 CGAP01215 116 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 SFTPBP07988 381 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 SULT1A3P0DMM9 295 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 SULT1A4P0DMN0 295 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 ARFRP1Q13795 201 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 TAF9Q16594 264 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 PNLIPRP3Q17RR3 467 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 TBC1D28Q2M2D7 210 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 RNASE10Q5GAN6 216 aaKnown RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 C6orf201Q7Z4U5 140 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 ZNF610Q8N9Z0 462 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 OR51F2Q8NH61 342 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 MBD3L2Q8NHZ7 208 aaPredicted RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 OPN3Q9H1Y3 402 aaPredicted RBP8.09□□□□□ -1.11
LINC00838-201ENST00000562956 ZNF69Q9UC07 566 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 ANAPC10Q9UM13 185 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 FAM215AQ9Y5M1 114 aa8.09□□□□□ -1.11
LINC00838-201ENST00000562956 SIX6O95475 246 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 CST4P01036 141 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 CRYABP02511 175 aaKnown RBP8.09□□□□□ -1.12
LINC00838-201ENST00000562956 PMP2P02689 132 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 IL5P05113 134 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 GPM6AP51674 278 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 MEF2DQ14814 521 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 PIGYQ3MUY2 71 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 SEZ6L2Q6UXD5 910 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 C3P1Q6ZMU1 363 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 CCDC36Q8IYA8 594 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 BATF2Q8N1L9 274 aa8.09□□□□□ -1.12
LINC00838-201ENST00000562956 ZNF611Q8N823 705 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms