RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 KITLGP21583 273 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 CA6P23280 308 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 HLA-DMAP28067 261 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 CA7P43166 264 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 HAAOP46952 286 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 TMEM50BP56557 158 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 RPS23P62266 143 aaKnown RBP11.81□□□□□ -0.52
TPM1-215ENST00000558868 MZT1Q08AG7 82 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 ARFRP1Q13795 201 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 MEF2DQ14814 521 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 MBNL2Q5VZF2 373 aaKnown RBP11.81□□□□□ -0.52
TPM1-215ENST00000558868 ELP2Q6IA86 826 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 SLC25A26Q70HW3 274 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 LIX1LQ8IVB5 337 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 SPERTQ8NA61 448 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 Q8NFD4 153 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 OR56B4Q8NH76 319 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 PECRQ9BY49 303 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 PLK3Q9H4B4 646 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 ZMAT3Q9HA38 289 aaKnown RBP11.81□□□□□ -0.52
TPM1-215ENST00000558868 PURGQ9UJV8 347 aaKnown RBP11.81□□□□□ -0.52
TPM1-215ENST00000558868 HSF4Q9ULV5 492 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 LRP5LA4QPB2 252 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 MEIS3P1A6NDR6 274 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 WIPF3A6NGB9 483 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 TMEM210A6NLX4 147 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 ERVH48-1M5A8F1 160 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 RAB3DO95716 219 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 PLA2G2AP14555 144 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 PMELP40967 661 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 IL24Q13007 206 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 PSG7Q13046 419 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 ACTBL2Q562R1 376 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 PLAC9Q5JTB6 97 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 ZNF782Q6ZMW2 699 aaPredicted RBP11.8□□□□□ -0.52
TPM1-215ENST00000558868 CALHM1Q8IU99 346 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 OR8G5Q8NG78 346 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 OR4C16Q8NGL9 310 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 UPRTQ96BW1 309 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 ARHGAP5-AS1Q96IT6 56 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 NEURL2Q9BR09 285 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 OCSTAMPQ9BR26 566 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 ADAT1Q9BUB4 502 aaKnown RBP11.8□□□□□ -0.52
TPM1-215ENST00000558868 TMEM100Q9NV29 134 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 NUDT15Q9NV35 164 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 PLEKHJ1Q9NW61 149 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 PLEKHA6Q9Y2H5 1048 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 CELSR3Q9NYQ7 3312 aa11.8□□□□□ -0.52
TPM1-215ENST00000558868 IGKV1-12A0A0C4DH73 117 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 DISC1C4P0D8 188 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 J3QT63 122 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 TIMM8AO60220 97 aaPredicted RBP11.79□□□□□ -0.52
TPM1-215ENST00000558868 PRAF2O60831 178 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 IGKV1D-12P01611 117 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 CD74P04233 296 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 CD3DP04234 171 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 HNRNPCP07910 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
TPM1-215ENST00000558868 GABRR1P24046 479 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 MPZP25189 248 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 CALCRP30988 508 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 CCR6P51684 374 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 FGF12P61328 243 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 ERVS71-1P61550 626 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 MRPS15P82914 257 aaKnown RBP11.79□□□□□ -0.52
TPM1-215ENST00000558868 ZMYND11Q15326 602 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 RBMS2Q15434 407 aaKnown RBP11.79□□□□□ -0.52
TPM1-215ENST00000558868 OR8G1Q15617 311 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 TATDN3Q17R31 274 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 NHLRC3Q5JS37 347 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 SFRP4Q6FHJ7 346 aaPredicted RBP11.79□□□□□ -0.52
TPM1-215ENST00000558868 RGS7BPQ6MZT1 257 aaPredicted RBP11.79□□□□□ -0.52
TPM1-215ENST00000558868 SEZ6L2Q6UXD5 910 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 LINC00596Q86U02 117 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 AKAP14Q86UN6 197 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 GLCCI1Q86VQ1 547 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 Q8IYB0 196 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 RELL2Q8NC24 303 aaPredicted RBP11.79□□□□□ -0.52
TPM1-215ENST00000558868 NUDCD2Q8WVJ2 157 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 ST8SIA4Q92187 359 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 OR51I2Q9H344 312 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 ANAPC10Q9UM13 185 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 ST3GAL6Q9Y274 331 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 POLDIP2Q9Y2S7 368 aa11.79□□□□□ -0.52
TPM1-215ENST00000558868 MYO7BQ6PIF6 2116 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 KALRNO60229 2985 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 MGAQ8IWI9 3026 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 TEX15Q9BXT5 2789 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 HMX3A6NHT5 357 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 NDUFB6O95139 128 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 NAT1P18440 290 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 GLRXP35754 106 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 MPV17P39210 176 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 RBM11P57052 281 aaKnown RBP11.78□□□□□ -0.52
TPM1-215ENST00000558868 TAF9Q16594 264 aa11.78□□□□□ -0.52
TPM1-215ENST00000558868 RNASE10Q5GAN6 216 aaKnown RBP11.78□□□□□ -0.52
TPM1-215ENST00000558868 TMEM255AQ5JRV8 349 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms