RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ZNF488Q96MN9 340 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 NRIP2Q9BQI9 281 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 PKIBQ9C010 78 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 EGLN1Q9GZT9 426 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 WDR13Q9H1Z4 485 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 CNTD2Q9H8S5 307 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 HES4Q9HCC6 221 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 SNTG1Q9NSN8 517 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 C14orf119Q9NWQ9 140 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 C1orf123Q9NWV4 160 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 SLC7A11Q9UPY5 501 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 PPP1R3CQ9UQK1 317 aa8.97□□□□□ -0.97
NPIPB3-210ENST00000542817 ABCA2Q9BZC7 2435 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 IGHV4-30-2A0A087WSY4 118 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 LOC100506127A0A0U1RQW1 187 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 J3QT63 122 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 SPRY1O43609 319 aaPredicted RBP8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 ANGPTL7O43827 346 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 AIREO43918 545 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 FCN3O75636 299 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 ACAA1P09110 424 aaPredicted RBP8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 PGA5P0DJD9 388 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 TNFRSF1AP19438 455 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 AMY2BP19961 511 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 GIFP27352 417 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 CFPP27918 469 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 OR3A4PP47883 348 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 NPBWR2P48146 333 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 NCS1P62166 190 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 LSM3P62310 102 aaKnown RBP8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 IL24Q13007 206 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 C1orf100Q5SVJ3 147 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 LHFPL2Q6ZUX7 228 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF573Q86YE8 665 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 Q8NFD4 153 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 OR5D18Q8NGL1 313 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 C10orf105Q8TEF2 133 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 CCL17Q92583 94 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 THRSPQ92748 146 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 BORCS8Q96FH0 119 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 HIST1H2AAQ96QV6 131 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 FOXC2Q99958 501 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 SSR3Q9UNL2 185 aa8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 AK6Q9Y3D8 172 aaKnown RBP8.96□□□□□ -0.98
NPIPB3-210ENST00000542817 SRRM5B3KS81 715 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 TPD52L2O43399 206 aaKnown RBP8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 AKR7A2O43488 359 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 ARL6IP5O75915 188 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF205O95201 554 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 PTTG1O95997 202 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 IGHV2-70P01814 119 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 SFTPBP07988 381 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 SDC2P34741 201 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF93P35789 620 aaPredicted RBP8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 RPS19P39019 145 aaKnown RBP8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 PTGFRP43088 359 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 MTNR1BP49286 362 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 ATP1B3P54709 279 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 CAV3P56539 151 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 ARPC4P59998 168 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 VBP1P61758 197 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 PPP3R1P63098 170 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 QRFPP83859 136 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 MZT1Q08AG7 82 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 ZMYND11Q15326 602 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 DDI2Q5TDH0 399 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 PRSS57Q6UWY2 283 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 SLC25A26Q70HW3 274 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 CDH26Q8IXH8 852 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 BATF2Q8N1L9 274 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 POC1AQ8NBT0 407 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 C19orf18Q8NEA5 215 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 OR10Z1Q8NGY1 313 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 DYNC2LI1Q8TCX1 351 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 LRRC29Q8WV35 223 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 HPS1Q92902 700 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 CYYR1Q96J86 154 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 MMP27Q9H306 513 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 CHODLQ9H9P2 273 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 FN3KRPQ9HA64 309 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 EXOSC4Q9NPD3 245 aaKnown RBP8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 DLL4Q9NR61 685 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 IL36RNQ9UBH0 155 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 CKLFQ9UBR5 152 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 TLN2Q9Y4G6 2542 aa8.95□□□□□ -0.98
NPIPB3-210ENST00000542817 A0A1W2PP11 408 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 SMIM30A4D0T7 59 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 KDM4BO94953 1096 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 FSTL3O95633 263 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 PLATP00750 562 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 TFF1P04155 84 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 HCKP08631 526 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 TMEM33P57088 247 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF45Q02386 682 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 PLA2G7Q13093 441 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 TEX36Q5VZQ5 186 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 NKAIN3Q8N8D7 197 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 ZSCAN4Q8NAM6 433 aaPredicted RBP8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 WFDC11Q8NEX6 87 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms