RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SATL1Q86VE3 508 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ANGPTL5Q86XS5 388 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SAXO1Q8IYX7 474 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 BPIFB2Q8N4F0 458 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SVOPQ8N4V2 548 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF561Q8N587 486 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 MS4A15Q8N5U1 240 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 PARP16Q8N5Y8 322 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM216BQ8N7L0 139 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 NANOGP1Q8N7R0 232 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZFP41Q8N8Y5 198 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZSCAN4Q8NAM6 433 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR5T2Q8NGG2 359 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR10AC1Q8NH08 325 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ANGPTL6Q8NI99 470 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 PPP1R35Q8TAP8 253 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 RPS4Y2Q8TD47 263 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 RAB40AQ8WXH6 277 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SLAMF9Q96A28 289 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 RNF166Q96A37 237 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 NRIP2Q9BQI9 281 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF649Q9BS31 505 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM192AQ9GZU8 254 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 FGF23Q9GZV9 251 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SLITRK2Q9H156 845 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 WDR13Q9H1Z4 485 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ELL3Q9HB65 397 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 RHOFQ9HBH0 211 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SMURF1Q9HCE7 757 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 TMEM138Q9NPI0 162 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 PCDHB16Q9NRJ7 776 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 PAK1IP1Q9NWT1 392 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 TAS2R4Q9NYW5 299 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SLC25A10Q9UBX3 287 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR14J1Q9UGF5 321 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 POLR3KQ9Y2Y1 108 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 INSIG2Q9Y5U4 225 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 HIVEP1P15822 2718 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 TANC2Q9HCD6 1990 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 HIVEP2P31629 2446 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 IGKV1D-17A0A075B6S4 117 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRBV23-1A0A0A0MS06 115 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 IGKV1-9A0A0C4DH69 117 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 KIR2DS1A0A191URI9 304 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 hCG_1809904A0A1W2PP81 198 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A1W2PPE2 198 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A1W2PR64 198 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A1W2PRV1 198 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 RFPL4AA6NLU0 287 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF879B4DU55 563 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 RFPL4AL1F8VTS6 287 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 SH2D1BO14796 132 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 SIGLEC5O15389 551 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 MRPS14O60783 128 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TOX4O94842 621 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 INMTO95050 263 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 CSTBP04080 98 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 CD1AP06126 327 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 CHRM2P08172 466 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 PPIAL4GP0DN37 164 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 PSG2P11465 335 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 HOXB4P17483 251 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 PRKACAP17612 351 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 FSTP19883 344 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 EPHA1P21709 976 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 PSMA1P25786 263 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 BDKRB2P30411 391 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 PRDX2P32119 198 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 RBMXP38159 391 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 RANBP1P43487 201 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 CAV3P56539 151 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 HOXA4Q00056 320 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ACSM1Q08AH1 577 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 PDZK1IP1Q13113 114 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 GPR50Q13585 617 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 PDCD1Q15116 288 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 RSU1Q15404 277 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 KISS1Q15726 138 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TBCEQ15813 527 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 SPIN3Q5JUX0 258 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ATPAF1Q5TC12 328 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 GPR157Q5UAW9 335 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 XAF1Q6GPH4 301 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF788Q6ZQV5 615 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 BTN2A1Q7KYR7 527 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 GDPD3Q7L5L3 318 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF367Q7RTV3 350 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 CALHM1Q8IU99 346 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM185AQ8N0U4 392 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM58AQ8N1B3 248 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 BATF2Q8N1L9 274 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 NKAIN3Q8N8D7 197 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ASCC1Q8N9N2 400 aaKnown RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR5D18Q8NGL1 313 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TBC1D15Q8TC07 691 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF418Q8TF45 676 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 TNFAIP8L1Q8WVP5 186 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 FCGR1BQ92637 280 aa4.49□□□□□ -1.69
HMGB1P40-201ENST00000525121 RFT1Q96AA3 541 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms