RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RPL26P61254 145 aaKnown RBP3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 SELENOTP62341 195 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 LIPEQ05469 1076 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ARFRP1Q13795 201 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 MRGPRG-AS1Q2M3A8 158 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR2G6Q5TZ20 316 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 C1orf146Q5VVC0 180 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 STUMQ69YW2 141 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 REEP3Q6NUK4 255 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 UNQ9370/PRO34162Q6UXP9 181 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF497Q6ZNH5 498 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 VTCN1Q7Z7D3 282 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF100Q8IYN0 542 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 RDH10Q8IZV5 341 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 LYG1Q8N1E2 194 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ATPAF2Q8N5M1 289 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 APCDD1LQ8NCL9 501 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF740Q8NDX6 193 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 PLPP5Q8NEB5 264 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR52I1Q8NGK6 324 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR2G2Q8NGZ5 317 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 LINC01006Q8NI28 216 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ATP5SQ99766 215 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 BCL7BQ9BQE9 202 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 FAIM2Q9BWQ8 316 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR52A5Q9H2C5 316 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 RGCCQ9H4X1 137 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ANKRA2Q9H9E1 313 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ANKHQ9HCJ1 492 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 CCNB1IP1Q9NPC3 277 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ACP6Q9NPH0 428 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 PACSIN2Q9UNF0 486 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 RPL26L1Q9UNX3 145 aaKnown RBP3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 TRAF3IP3Q9Y228 551 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 PLECQ15149 4684 aaKnown RBP3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 DNAH10Q8IVF4 4471 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 TRBV9A0A0B4J1U6 114 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 A0A1B0GW55 424 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF860A6NHJ4 632 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 NSA2O95478 260 aaKnown RBP3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 IGHV2-5P01817 119 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 C1QAP02745 245 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 HPNP05981 417 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 TPM1P09493 284 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 DUX4L2P0CJ85 424 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 DUX4L3P0CJ86 424 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 DUX4L5P0CJ88 424 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 DUX4L6P0CJ89 424 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 DUX4L7P0CJ90 424 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 PRB4P10163 310 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 GSTM3P21266 225 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 CD9P21926 228 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 PCK1P35558 622 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 MDH2P40926 338 aaKnown RBP3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 TMED10P49755 219 aaKnown RBP3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLDN18P56856 261 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 EIF3EP60228 445 aaKnown RBP3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 RAB11AP62491 216 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 FAM53BQ14153 422 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 FCN2Q15485 313 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 ATP6AP1Q15904 470 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 RAB11BQ15907 218 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 ALKBH6Q3KRA9 238 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 ATAD3CQ5T2N8 411 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF544Q6NX49 715 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 TRIM40Q6P9F5 258 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 DUX4L9Q6RFH8 374 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 C19orf35Q6ZS72 473 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 Q6ZTC4 211 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 PDIK1LQ8N165 341 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 JAGN1Q8N5M9 183 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 PQLC3Q8N755 202 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF321PQ8N8H1 164 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 BBS1Q8NFJ9 593 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR5K2Q8NHB8 316 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 RHOXF1Q8NHV9 184 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 FAM172AQ8WUF8 416 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 MUCL1Q96DR8 90 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 ITCHQ96J02 903 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 EBF4Q9BQW3 602 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 CHID1Q9BWS9 393 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 TMEM59Q9BXS4 323 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 RAB1BQ9H0U4 201 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 STMN4Q9H169 189 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 DUX4Q9UBX2 424 aa3.48□□□□□ -1.85
HMGB1P23-201ENST00000518743 KMT2AQ03164 3969 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 HUWE1Q7Z6Z7 4374 aaKnown RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 KCNE1BA0A087WTH5 132 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 GLYATL1P3A0A0U1RQE8 302 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 AGPAT2O15120 278 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 ANGPTL7O43827 346 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 CHST1O43916 411 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 EEDO75530 441 aaKnown RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 FOLR2P14207 255 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 HPGDP15428 266 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 PSMB1P20618 241 aaKnown RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 SHC1P29353 583 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 CASP1P29466 404 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 NUP62P37198 522 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 GPR6P46095 362 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms