RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 HMGCS1Q01581 520 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 MLLT11Q13015 90 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 GAGE5Q13069 117 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 GAGE6Q13070 117 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 PRDX4Q13162 271 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 GPNMBQ14956 572 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SNAI3Q3KNW1 292 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ARHGAP11BQ3KRB8 267 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ACSM3Q53FZ2 586 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 CT45A2Q5DJT8 189 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 COA6Q5JTJ3 125 aaKnown RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM198Q66K66 360 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR2T2Q6IF00 324 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 NCEH1Q6PIU2 408 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM220Q6QAJ8 160 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 UNQ9370/PRO34162Q6UXP9 181 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF730Q6ZMV8 503 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 Q6ZPB1 254 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 C15orf39Q6ZRI6 1047 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 MBOAT2Q6ZWT7 520 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 CHST9Q7L1S5 443 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 LINC00346Q8IVM7 164 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 C9orf40Q8IXQ3 194 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TOMM5Q8N4H5 51 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 KCNRGQ8N5I3 272 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 RBMXL3Q8N7X1 1067 aaKnown RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TSTD1Q8NFU3 115 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR51S1Q8NGJ8 323 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR4A4PQ8NGN8 299 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR51Q1Q8NH59 317 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TNFAIP8L1Q8WVP5 186 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 FAM46BQ96A09 425 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 NTNG2Q96CW9 530 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 MMABQ96EY8 250 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ACY3Q96HD9 319 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 UHRF2Q96PU4 802 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 PEBP4Q96S96 227 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SIGMAR1Q99720 223 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ARHGDIGQ99819 225 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 PSMG3Q9BT73 122 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TAPBPLQ9BX59 468 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 FXYD6Q9H0Q3 95 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 BEX1Q9HBH7 125 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF160Q9HCG1 818 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM100Q9NV29 134 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM38BQ9NVV0 291 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 NDUFB11Q9NX14 153 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC2A8Q9NY64 477 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 BET1LQ9NYM9 111 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 AHSPQ9NZD4 102 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 MRPL27Q9P0M9 148 aaKnown RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ABI3Q9P2A4 366 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 MARCH4Q9P2E8 410 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 NAT8Q9UHE5 227 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 EXO1Q9UQ84 846 aaKnown RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 RASD1Q9Y272 281 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 AK6Q9Y3D8 172 aaKnown RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR10H1Q9Y4A9 318 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TEX264Q9Y6I9 313 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 LOC285556D6RIA3 1793 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 A0A0A6YYC8 382 aaPredicted RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 SMIM28A0A1B0GU29 152 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RNF222A6NCQ9 220 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ASPDHA6ND91 283 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 FAM166BA8MTA8 275 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 PRAC2D3DTV9 90 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 C16orf97H3BN30 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 I3L1I5 382 aaPredicted RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 SULT2B1O00204 365 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF593O00488 134 aaPredicted RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 PIRO00625 290 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 VCYO14598 125 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 LINC01565O15544 149 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HCRTR1O43613 425 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 FGF17O60258 216 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BKO60814 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TNFSF13O75888 250 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 NKX2-2O95096 273 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 S1PR2O95136 353 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 CDRT1O95170 752 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 GJB5O95377 273 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TXNDC12O95881 172 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 JCHAINP01591 159 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 IGKV3-20P01619 116 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BJP06899 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 DCNP07585 359 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 CD14P08571 375 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF286BP0CG31 522 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 GPX2P18283 190 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 EPORP19235 508 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TPSB2P20231 275 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 KITLGP21583 273 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BOP23527 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 MMP11P24347 488 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BBP33778 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 KDELR2P33947 212 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TGFBR1P36897 503 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 MDH2P40926 338 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 BDKRB1P46663 353 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 GSK3BP49841 420 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms