RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	CD177	Q8N6Q3	437 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	LY6G5B	Q8NDX9	201 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	SETD9	Q8NE22	299 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ZFAND2B	Q8WV99	257 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	PP6455	Q8WZ26	134 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	LHX4	Q969G2	390 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	NRIP2	Q9BQI9	281 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	PKIB	Q9C010	78 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	FGF20	Q9NP95	211 aa	Predicted RBP	11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ZNF222	Q9UK12	451 aa		11.67	□□□□□ -0.54
CCHCR1-222	ENST00000507459	CENPVL3	A0A0U1RRI6	287 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459		A0A1W2PQ09	198 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ERICH4	A6NGS2	130 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	LIMS3	P0CW19	117 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	LIMS4	P0CW20	117 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ATF1	P18846	271 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	MPZ	P25189	248 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	RBP2	P50120	134 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ETV1	P50549	477 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	GTF2A1	P52655	376 aa	Predicted RBP	11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ATP1B3	P54709	279 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	MTCP1	P56278	107 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	UBA52	P62987	128 aa	Known RBP	11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	PRB3	Q04118	309 aa	Predicted RBP	11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	IL24	Q13007	206 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	PDCD1	Q15116	288 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	C9orf139	Q6ZV77	190 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	SLC25A26	Q70HW3	274 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	VMO1	Q7Z5L0	202 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	CMTM4	Q8IZR5	234 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	FAM216A	Q8WUB2	273 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ZDHHC16	Q969W1	377 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	SLAMF9	Q96A28	289 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	SDSL	Q96GA7	329 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	PDCD1LG2	Q9BQ51	273 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	DCLRE1B	Q9H816	532 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	SIRT7	Q9NRC8	400 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	MTCH1	Q9NZJ7	389 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	KPTN	Q9Y664	436 aa		11.66	□□□□□ -0.54
CCHCR1-222	ENST00000507459	STAB1	Q9NY15	2570 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	IGKV1-9	A0A0C4DH69	117 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	TRBV2	A0A0J9YWF9	115 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	DNAJC9-AS1	A6NH13	148 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459		F8VVB4	439 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459		F8VWA3	439 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	SLC1A7	O00341	560 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	CASQ2	O14958	399 aa	Predicted RBP	11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	ZFPL1	O95159	310 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	GNAO1	P09471	354 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	PRKACB	P22694	351 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	AZGP1	P25311	298 aa	Known RBP	11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	DCK	P27707	260 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	CAPG	P40121	348 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	POU3F4	P49335	361 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	DLX1	P56177	255 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	CAV3	P56539	151 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	GABPB1	Q06547	395 aa	Predicted RBP	11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	MRPL28	Q13084	256 aa	Known RBP	11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	DEFB112	Q30KQ8	113 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	OR2G6	Q5TZ20	316 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	UTS2B	Q765I0	119 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	FAM185A	Q8N0U4	392 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	OR13C9	Q8NGT0	318 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	OR5AK2	Q8NH90	309 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	GATAD2B	Q8WXI9	593 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	GCDH	Q92947	438 aa	Predicted RBP	11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	RFT1	Q96AA3	541 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	CEP19	Q96LK0	163 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	COMMD4	Q9H0A8	199 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	HES4	Q9HCC6	221 aa		11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.65	□□□□□ -0.54
CCHCR1-222	ENST00000507459	IGHV1-69D	A0A0B4J2H0	117 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	IRGM	A1A4Y4	181 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TMEM212	A6NML5	194 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SPRY1	O43609	319 aa	Predicted RBP	11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CYB5A	P00167	134 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	IGHV1-69	P01742	117 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CCDC159	P0C7I6	412 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CALCB	P10092	127 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	MYL12A	P19105	171 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	PRTN3	P24158	256 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	BPIFB3	P59826	476 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ERVK11-1	P61568	191 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	IL18R1	Q13478	541 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TUSC1	Q2TAM9	212 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	XAF1	Q6GPH4	301 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TMPRSS11A	Q6ZMR5	421 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	EGFL6	Q8IUX8	553 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ZNF561	Q8N587	486 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	DNAAF1	Q8NEP3	725 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	C8orf46	Q8TAG6	207 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TSEN15	Q8WW01	171 aa	Known RBP	11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	EMG1	Q92979	244 aa	Known RBP	11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	C1orf147	Q96MC9	270 aa	Predicted RBP	11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	OPALIN	Q96PE5	141 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SPACA5	Q96QH8	159 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	JAM3	Q9BX67	310 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	VCX	Q9H320	206 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TNFRSF19	Q9NS68	423 aa		11.64	□□□□□ -0.55

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