RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NEU3Q9UQ49 428 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 OR5H15A6NDH6 313 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 OR5B21A6NL26 309 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 ADAM20O43506 726 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 TNFSF14O43557 240 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 RAC3P60763 192 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 HLXQ14774 488 aaPredicted RBP14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 GUK1Q16774 197 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 STUMQ69YW2 141 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 TMEM88Q6PEY1 159 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 WDR74Q6RFH5 385 aaPredicted RBP14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 MAP6Q96JE9 813 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 HES4Q9HCC6 221 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 SBF2Q86WG5 1849 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNF320A2RRD8 509 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 PRSS44E7EML9 344 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 CTDSPLO15194 276 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 ONECUT2O95948 504 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 RAB7AP51149 207 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNF770Q6IQ21 691 aaPredicted RBP14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 C16orf47Q6ZP98 133 aaPredicted RBP14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 MOB3BQ86TA1 216 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 NPEPL1Q8NDH3 523 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 HES7Q9BYE0 225 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 MIDNQ504T8 468 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 SLC25A30Q5SVS4 291 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 DUSP18Q8NEJ0 188 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 FLRT3Q9NZU0 649 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 CLCF1Q9UBD9 225 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 GSTZ1O43708 216 aaPredicted RBP14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNF83P51522 516 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 PLAC9Q5JTB6 97 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 SF3B5Q9BWJ5 86 aaKnown RBP14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNF768Q9H5H4 540 aaKnown RBP14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 FFAR1O14842 300 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 HYAL3O43820 417 aaPredicted RBP14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 IGHA1P01876 353 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 C1orf210Q8IVY1 113 aa14.68□□□□□ -0.06
PCDHA1-203ENST00000504120 DBX1A6NMT0 343 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 MPZL1O95297 269 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 PAX6P26367 422 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 LPAR6P43657 344 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNF429Q86V71 674 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 OR10AD1Q8NGE0 317 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 OR2T6Q8NHC8 308 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 ABHD1Q96SE0 405 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 ZDHHC11Q9H8X9 412 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 PJVKQ0ZLH3 352 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 IL13RA2Q14627 380 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 FAHD2BQ6P2I3 314 aaPredicted RBP14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 NHLRC1Q6VVB1 395 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 DGAT2L6Q6ZPD8 337 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 CLRN3Q8NCR9 226 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 FAHD2AQ96GK7 314 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 DHRS9Q9BPW9 319 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 MRPL22Q9NWU5 206 aaKnown RBP14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 MPC1Q9Y5U8 109 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 TMEM265A0A087WTH1 108 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 LSM6P62312 80 aaKnown RBP14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 CD226Q15762 336 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 ISXQ2M1V0 245 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 MESTQ5EB52 335 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 FOCADQ5VW36 1801 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 SFTPA1Q8IWL2 248 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 ATAD5Q96QE3 1844 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 LHX9Q9NQ69 397 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 LSM2Q9Y333 95 aaKnown RBP14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 C5orf67F2Z3F1 127 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 MPC2O95563 127 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 RAB5AP20339 215 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 RAB32Q13637 225 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 RNF212Q495C1 297 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 FAM122AQ96E09 287 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 PHYHIPLQ96FC7 376 aa14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 FAM103A1Q9BTL3 118 aaKnown RBP14.67□□□□□ -0.06
PCDHA1-203ENST00000504120 KIR2DS2P43631 304 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 C4orf17Q53FE4 359 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 PRR27Q6MZM9 219 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 PRSS54Q6PEW0 395 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 LRRTM1Q86UE6 522 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 OR2Y1Q8NGV0 311 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 ICAM5Q9UMF0 924 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 LIPT2A6NK58 231 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 SLC38A11Q08AI6 406 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 FOXC1Q12948 553 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNF528Q3MIS6 628 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 GGNBP1Q5YKI7 109 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 D2HGDHQ8N465 521 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 OR4D11Q8NGI4 311 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 OR5D13Q8NGL4 314 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 MOB3AQ96BX8 217 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 NEIL1Q96FI4 390 aaPredicted RBP14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 PCOLCE2Q9UKZ9 415 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 PPP1CBP62140 327 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 OR8B12Q8NGG6 310 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 C10orf35Q96D05 121 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 RASL10BQ96S79 203 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 UCK1Q9HA47 277 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 KNL1Q8NG31 2342 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms