RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NEUROG3Q9Y4Z2 214 aa2.88□□□□□ -1.95
ECHDC1-217ENST00000488087 DNAJC15Q9Y5T4 150 aa2.88□□□□□ -1.95
ECHDC1-217ENST00000488087 FOCADQ5VW36 1801 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 SBF2Q86WG5 1849 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 IGLV3-22A0A075B6J6 115 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PPIAL4CA0A0B4J2A2 164 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TMEM72A0PK05 275 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 A8MWP6 167 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 K7EP13 123 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 GPR31O00270 319 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 UBFD1O14562 309 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC16A4O15374 487 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TGOLN2O43493 480 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 CHST10O43529 356 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 CTNSO60931 367 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ICOSLGO75144 302 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 CDRT1O95170 752 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 AHSA1O95433 338 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 AP2A1O95782 977 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 C6orf47O95873 294 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 JCHAINP01591 159 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PPBPP02775 128 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 GUSBP08236 651 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PPIAL4GP0DN37 164 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 CD79AP11912 226 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ADCYAP1P18509 176 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 GABRR1P24046 479 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 S100A2P29034 98 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 AGTR1P30556 359 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ACVR1BP36896 505 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 MDH2P40926 338 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 MAP3K8P41279 467 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OMPP47874 163 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OR1D4P47884 311 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PRKXP51817 358 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 VSX2P58304 361 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 DYNLL1P63167 89 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 NTHL1P78549 312 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PITPNAQ00169 270 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TGIF1Q15583 401 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 EXOC3L2Q2M3D2 409 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 QRICH1Q2TAL8 776 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC36A2Q495M3 483 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 CARD16Q5EG05 197 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PYY3Q5JQD4 70 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 UTF1Q5T230 341 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 IDNKQ5T6J7 187 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 HIST2H3PS2Q5TEC6 136 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 EIF5AL1Q6IS14 154 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 H3F3CQ6NXT2 135 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ENPP6Q6UWR7 440 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 DRAM2Q6UX65 266 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 LRRN1Q6UXK5 716 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TMEM91Q6ZNR0 172 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 HSD11B1LQ7Z5J1 315 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ANKRD37Q7Z713 158 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 MFSD6LQ8IWD5 586 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ZBTB8OSQ8IWT0 167 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 HS3ST5Q8IZT8 346 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 STK40Q8N2I9 435 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 GPR137CQ8N3F9 429 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ZNF283Q8N7M2 679 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 SYT14Q8NB59 555 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 B3GNT7Q8NFL0 401 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OR5D13Q8NGL4 314 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OR5M1Q8NGP8 315 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OR10K1Q8NGX5 313 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OR10A6Q8NH74 314 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 COQ8AQ8NI60 647 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PIGXQ8TBF5 258 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TWIST2Q8WVJ9 160 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 RLN3Q8WXF3 142 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 C22orf15Q8WYQ4 148 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 HIST1H2BAQ96A08 127 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 CMTM7Q96FZ5 175 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 MED8Q96G25 268 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 SMARCD1Q96GM5 515 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 SMIM8Q96KF7 97 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 FAM210BQ96KR6 192 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PPP1R36Q96LQ0 422 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OR4K3Q96R72 315 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 PANX1Q96RD7 426 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 GINS4Q9BRT9 223 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 RIOK2Q9BVS4 552 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 C1QTNF6Q9BXI9 259 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ELOVL4Q9GZR5 314 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 OR51B6Q9H340 312 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ASB8Q9H765 288 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 METTL17Q9H7H0 456 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 REEP1Q9H902 201 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 NMNAT1Q9HAN9 279 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 ZDHHC4Q9NPG8 344 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TMEM100Q9NV29 134 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 CLN6Q9NWW5 311 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 C1orf109Q9NX04 203 aa2.87□□□□□ -1.95
ECHDC1-217ENST00000488087 TAS2R5Q9NYW4 299 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms