RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 IL24Q13007 206 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 GALEQ14376 348 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 SMN1Q16637 294 aaKnown RBP10.6□□□□□ -0.71
HDAC1-209ENST00000484305 LRRC36Q1X8D7 754 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 TMEM244Q5VVB8 128 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 Q6YL49 198 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 CMTM4Q8IZR5 234 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 KIR3DL3Q8N743 410 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 OR52I1Q8NGK6 324 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 OR10AC1Q8NH08 325 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 TAF15Q92804 592 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC1-209ENST00000484305 ZDHHC16Q969W1 377 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 FGGYQ96C11 551 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 C10orf35Q96D05 121 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 ALG8Q9BVK2 526 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 PKIBQ9C010 78 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 ERVK13-1Q9NX77 482 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 MTCH1Q9NZJ7 389 aa10.6□□□□□ -0.71
HDAC1-209ENST00000484305 IGKV1-9A0A0C4DH69 117 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 A0A0U1RQK1 487 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 A0A1W2PQ09 198 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 F8VVB4 439 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 F8VWA3 439 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 SLC1A7O00341 560 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 INMTO95050 263 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 FADS2O95864 444 aaKnown RBP10.59□□□□□ -0.71
HDAC1-209ENST00000484305 SERPINA3P01011 423 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 HKR1P10072 659 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 CCR9P51686 369 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 CAPZA1P52907 286 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 RAB40BQ12829 278 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 ALKBH1Q13686 389 aaKnown RBP10.59□□□□□ -0.71
HDAC1-209ENST00000484305 AWAT1Q58HT5 328 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 LPCAT4Q643R3 524 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 METAP1DQ6UB28 335 aaPredicted RBP10.59□□□□□ -0.71
HDAC1-209ENST00000484305 SYS1Q8N2H4 156 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 ZNF561Q8N587 486 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 ZNF555Q8NEP9 628 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 OR51A4Q8NGJ6 313 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 PP6455Q8WZ26 134 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 SLAMF9Q96A28 289 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 BORCS8Q96FH0 119 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 RDH12Q96NR8 316 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 NOX4Q9NPH5 578 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 TNFRSF19Q9NS68 423 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 C19orf12Q9NSK7 152 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 OR14J1Q9UGF5 321 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 RPL36Q9Y3U8 105 aaKnown RBP10.59□□□□□ -0.71
HDAC1-209ENST00000484305 DSCAML1Q8TD84 2053 aa10.59□□□□□ -0.71
HDAC1-209ENST00000484305 E9PI62 339 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 RNASEK-C17orf49H0YIS7 233 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 CLIC3O95833 236 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 MELTFP08582 738 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 ZNF20P17024 532 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 KLRD1Q13241 179 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 RCN1Q15293 331 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 CNN3Q15417 329 aaKnown RBP10.58□□□□□ -0.72
HDAC1-209ENST00000484305 C16orf87Q6PH81 154 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 C1orf122Q6ZSJ8 110 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 SLC25A26Q70HW3 274 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 UTS2BQ765I0 119 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 FAM185AQ8N0U4 392 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 ZNF676Q8N7Q3 588 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 C3orf56Q8N813 242 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 TNFRSF14Q92956 283 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 MRPL48Q96GC5 212 aaKnown RBP10.58□□□□□ -0.72
HDAC1-209ENST00000484305 CEP19Q96LK0 163 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 INPP5EQ9NRR6 644 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 MRPS18AQ9NVS2 196 aaKnown RBP10.58□□□□□ -0.72
HDAC1-209ENST00000484305 HHLA2Q9UM44 414 aa10.58□□□□□ -0.72
HDAC1-209ENST00000484305 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 A0A1W2PRD5 423 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 A0A1W2PRF3 423 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 A0A1W2PRM7 423 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 ANKRD65E5RJM6 399 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 M0R1W7 72 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 KNG1P01042 644 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 LIMS3P0CW19 117 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 LIMS4P0CW20 117 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 ATF1P18846 271 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 AZGP1P25311 298 aaKnown RBP10.57□□□□□ -0.72
HDAC1-209ENST00000484305 PEX2P28328 305 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 RBP2P50120 134 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 ATP1B3P54709 279 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 MTCP1P56278 107 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 FOXL1Q12952 345 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 KLHL22Q53GT1 634 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 ZNF691Q5VV52 312 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 TMEM200BQ69YZ2 307 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 RNF144BQ7Z419 303 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 EGFL6Q8IUX8 553 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 PNKDQ8N490 385 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 DNAAF1Q8NEP3 725 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 CNIH3Q8TBE1 160 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 CYGBQ8WWM9 190 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 MYCBPQ99417 103 aaPredicted RBP10.57□□□□□ -0.72
HDAC1-209ENST00000484305 CHIAQ9BZP6 476 aa10.57□□□□□ -0.72
HDAC1-209ENST00000484305 SPRY1O43609 319 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms