RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 YPEL5P62699 121 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 KIR2DS5Q14953 304 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 CHST4Q8NCG5 386 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 GTF2A1LQ9UNN4 478 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 LRP12Q9Y561 859 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 CPAMD8Q8IZJ3 1885 aa10.19□□□□□ -0.78
SEC61A1-205ENST00000483956 DCDC2BA2VCK2 349 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 MT-ATP6P00846 226 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 COL9A1P20849 921 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 S100A7P31151 101 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 TNFSF10P50591 281 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 CARD18P57730 90 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 RND3P61587 244 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 SGCBQ16585 318 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 LCN10Q6JVE6 187 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 TMEM182Q6ZP80 229 aaPredicted RBP10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 SLC16A14Q7RTX9 510 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 SLC37A2Q8TED4 501 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 PPP1R14AQ96A00 147 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 WFIKKN1Q96NZ8 548 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 ALKBH3Q96Q83 286 aaPredicted RBP10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 HIST1H2AAQ96QV6 131 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 ABHD6Q9BV23 337 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 ARV1Q9H2C2 271 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 CDH20Q9HBT6 801 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 HHLA2Q9UM44 414 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 CHD3Q12873 2000 aaKnown RBP10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 A0A1B0GW64 132 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 ZNF260Q3ZCT1 412 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 ZNF880Q6PDB4 577 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 C17orf78Q8N4C9 275 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 OR52N5Q8NH56 324 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 LSM5Q9Y4Y9 91 aaKnown RBP10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 LIPGQ9Y5X9 500 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 R4GMQ9 66 aa10.18□□□□□ -0.78
SEC61A1-205ENST00000483956 OR6A2O95222 327 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 IGHMP01871 453 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 DNASE1L1P49184 302 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 CLDN6P56747 220 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 ACKR1Q16570 336 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 PCK2Q16822 640 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 VHLLQ6RSH7 139 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 C16orf54Q6UWD8 224 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 LFNGQ8NES3 379 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 OR52N4Q8NGI2 321 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 PRRX2Q99811 253 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 KLHDC3Q9BQ90 382 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 OR2J1Q9GZK6 312 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 DKKL1Q9UK85 242 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 ZFP30Q9Y2G7 519 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 RFNGQ9Y644 331 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 TMEM131Q92545 1883 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 KIF26BQ2KJY2 2108 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 A6NIZ1 184 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 SLC16A7O60669 478 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 HPRT1P00492 218 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 LCATP04180 440 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 HOXB2P14652 356 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 RAP1BP61224 184 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 IAH1Q2TAA2 248 aaPredicted RBP10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 OTPQ5XKR4 325 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 LEMD1Q68G75 181 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 DNASE2BQ8WZ79 361 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 HLA-CQ95604 372 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 TSLPQ969D9 159 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 C5orf34Q96MH7 638 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 TXNIPQ9H3M7 391 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 VAX2Q9UIW0 290 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 STRAPQ9Y3F4 350 aaKnown RBP10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 USP34Q70CQ2 3546 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 ATG2AQ2TAZ0 1938 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 REV3LO60673 3130 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 LOC107986453A0A1B0GWG9 222 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 GSTP1P09211 210 aaKnown RBP10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 CTLA4P16410 223 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 ZNF117Q03924 483 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 TMEM240Q5SV17 173 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 SFTPA2Q8IWL1 248 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 NUDT16L1Q9BRJ7 211 aaKnown RBP10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 ABHD14AQ9BUJ0 271 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 GPR132Q9UNW8 380 aa10.17□□□□□ -0.78
SEC61A1-205ENST00000483956 C11orf98E9PRG8 122 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 CCL25O15444 150 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 DEDDO75618 318 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 SUCLG1P53597 346 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 HSF1Q00613 529 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 SPOCK1Q08629 439 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 SLC25A26Q70HW3 274 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 ZNF100Q8IYN0 542 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 OR4D6Q8NGJ1 314 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 SLC46A1Q96NT5 459 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 GINS3Q9BRX5 216 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 NXF5Q9H1B4 397 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 G6PC2Q9NQR9 355 aa10.16□□□□□ -0.78
SEC61A1-205ENST00000483956 MEMO1Q9Y316 297 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms