RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 CHST4Q8NCG5 386 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 LRRC29Q8WV35 223 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 C16orf74Q96GX8 76 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 ZNF75AQ96N20 296 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 CYTH2Q99418 400 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 UBXN6Q9BZV1 441 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 LRRC19Q9H756 370 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 FBXO8Q9NRD0 319 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 EURLQ9NYK6 297 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 MTFP1Q9UDX5 166 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 TRAPPC4Q9Y296 219 aa5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 PRG3Q9Y2Y8 225 aaPredicted RBP5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 TSSC4Q9Y5U2 329 aaPredicted RBP5.26□□□□□ -1.57
GAPVD1-217ENST00000479511 IGF2RP11717 2491 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 GREB1Q4ZG55 1949 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 TRAV8-7A0A075B6U6 113 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 BCL2L11O43521 198 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 NPIPB7O75200 414 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 RDH16O75452 317 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 CDK14O94921 469 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 ZNF30P17039 623 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 COILP38432 576 aaPredicted RBP5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 HSPA9P38646 679 aaKnown RBP5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 PMS2P3Q13401 168 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 COTL1Q14019 142 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 ZNF630Q2M218 657 aaPredicted RBP5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 RFX4Q33E94 735 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 CPTPQ5TA50 214 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 SPOPLQ6IQ16 392 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 ZNF544Q6NX49 715 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 FAHD1Q6P587 224 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 ABCA7Q8IZY2 2146 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 C17orf78Q8N4C9 275 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 NPBQ8NG41 125 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 TMEM239Q8WW34 195 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 RNF185Q96GF1 192 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 TMEM101Q96IK0 257 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 GABRG3Q99928 467 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 BEX2Q9BXY8 128 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 SLC25A37Q9NYZ2 338 aa5.25□□□□□ -1.57
GAPVD1-217ENST00000479511 PTPRJQ12913 1337 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 A0A0B4J2E0 115 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 ARL5CA6NH57 179 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 M0QYV0 167 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 DFFAO00273 331 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 SMIM10L1P0DMW3 83 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 KCNE1P15382 129 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 PCK1P35558 622 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 PRLHRP49683 370 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 HCCSP53701 268 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 TAS2R39P59534 338 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 INCA1Q0VD86 236 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 DYNC1I2Q13409 638 aaKnown RBP5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 DGCR6Q14129 220 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 HERPUD1Q15011 391 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 KRTAP27-1Q3LI81 207 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 TFDP3Q5H9I0 405 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 BAIAP2L2Q6UXY1 529 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 C4orf22Q6V702 233 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 TRMT10CQ7L0Y3 403 aaKnown RBP5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 STRADAQ7RTN6 431 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 C11orf72Q8NBR9 251 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 HAUS1Q96CS2 278 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 RCN3Q96D15 328 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 SNF8Q96H20 258 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 SMIM10Q96HG1 83 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 MCEEQ96PE7 176 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 OSBPL11Q9BXB4 747 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 YTHDF1Q9BYJ9 559 aaKnown RBP5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 NDEL1Q9GZM8 345 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 CES1P1Q9UKY3 287 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 SCML1Q9UN30 329 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 OR51B2Q9Y5P1 312 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 MYO18BQ8IUG5 2567 aa5.24□□□□□ -1.57
GAPVD1-217ENST00000479511 TSC2P49815 1807 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 ANKRD20A5PA0PJZ0 165 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 RNASEK-C17orf49H0YIS7 233 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 XKRYO14609 159 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 ALOX12BO75342 701 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 RAB3DO95716 219 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 GABRR1P24046 479 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 GNRHRP30968 328 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 SDC4P31431 198 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 PFN2P35080 140 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 TAF6P49848 677 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 CAV2P51636 162 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 PLTPP55058 493 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 AP1S2P56377 157 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 UBE2KP61086 200 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 PRR3P79522 188 aaKnown RBP5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 SLC7A9P82251 487 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 PDK2Q15119 407 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 COA6Q5JTJ3 125 aaKnown RBP5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 P2RY8Q86VZ1 359 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 SPAG16Q8N0X2 631 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 TMEM86AQ8N2M4 240 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 OR4S2Q8NH73 311 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 GTF2H4Q92759 462 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 FAM107BQ9H098 131 aa5.23□□□□□ -1.57
GAPVD1-217ENST00000479511 KLF12Q9Y4X4 402 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms