RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 HIST1H1CP16403 213 aaKnown RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 CCNE1P24864 410 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PAX6P26367 422 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 GTF2H1P32780 548 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 DRD3P35462 400 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PPP1R2P41236 205 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 RPS9P46781 194 aaKnown RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PSMB2P49721 201 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 CAV2P51636 162 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 DLX6P56179 175 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 CLDN12P56749 244 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 RPL10AP62906 217 aaKnown RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 REEP5Q00765 189 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 GINS1Q14691 196 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 FCN2Q15485 313 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PRSS8Q16651 343 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 Q1RN00 199 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 TTC32Q5I0X7 151 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 ATAD3CQ5T2N8 411 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 HES5Q5TA89 166 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 OGFRL1Q5TC84 451 aaPredicted RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 LPCAT4Q643R3 524 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PPP1R2P3Q6NXS1 205 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 ARL9Q6T311 187 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 NCCRP1Q6ZVX7 275 aaPredicted RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 DEFB132Q7Z7B7 95 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 ENTHD1Q8IYW4 607 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 Q8N402 240 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 C2orf73Q8N5S3 287 aaPredicted RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 C11orf72Q8NBR9 251 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 OR6N1Q8NGY5 312 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 FAM45AQ8TCE6 357 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 ACTRT1Q8TDG2 376 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 C22orf15Q8WYQ4 148 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 ESR2Q92731 530 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 DDIT4LQ96D03 193 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 YIPF6Q96EC8 236 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SEH1LQ96EE3 360 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PGLYRP3Q96LB9 341 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 RBP7Q96R05 134 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 TMED9Q9BVK6 235 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 NUDT9Q9BW91 350 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 DEFB126Q9BYW3 111 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 GFRA4Q9GZZ7 299 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 DHX35Q9H5Z1 703 aaKnown RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 RHOFQ9HBH0 211 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SPANXB1Q9NS25 103 aaPredicted RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 VAX2Q9UIW0 290 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 TRAPPC4Q9Y296 219 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 A0A1W2PP64 1363 aa3.09□□□□□ -1.92
VPS13D-207ENST00000476169 CPSF1Q10570 1443 aaKnown RBP3.09□□□□□ -1.92
VPS13D-207ENST00000476169 ROBO1Q9Y6N7 1651 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 SETD1AO15047 1707 aaKnown RBP3.08□□□□□ -1.92
VPS13D-207ENST00000476169 SPHKAPQ2M3C7 1700 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 A0A087WWV3 80 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 TRAV8-6A0A0B4J262 113 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 F5H5T6 163 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 HAT1O14929 419 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 FGF16O43320 207 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 RPP14O95059 124 aaKnown RBP3.08□□□□□ -1.92
VPS13D-207ENST00000476169 MOSP00540 346 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 IFNA5P01569 189 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 HLA-AP01891 365 aaKnown RBP3.08□□□□□ -1.92
VPS13D-207ENST00000476169 HSPB1P04792 205 aaKnown RBP3.08□□□□□ -1.92
VPS13D-207ENST00000476169 RPS17P08708 135 aaKnown RBP3.08□□□□□ -1.92
VPS13D-207ENST00000476169 FOLR2P14207 255 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 CELP19835 753 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 PSMB9P28065 219 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 HTR1DP28221 377 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 TTPAP49638 278 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 AP3S2P59780 193 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 CYP24A1Q07973 514 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 INCA1Q0VD86 236 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 SHHQ15465 462 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 HIGD2BQ4VC39 106 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 ACTBL2Q562R1 376 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 CASC10Q5T4H9 136 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 AVPI1Q5T686 147 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 HHATQ5VTY9 493 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 STEAP4Q687X5 459 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 FBXW12Q6X9E4 464 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 RTL4Q6ZR62 310 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 FAM92BQ6ZTR7 304 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 SLC13A5Q86YT5 568 aaPredicted RBP3.08□□□□□ -1.92
VPS13D-207ENST00000476169 LGI3Q8N145 548 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 GAPTQ8N292 157 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 ZNF525Q8N782 197 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 OR8K1Q8NGG5 319 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 OR13G1Q8NGZ3 307 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 BLNKQ8WV28 456 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 RNF185Q96GF1 192 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 CCDC42Q96M95 316 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 METTL26Q96S19 204 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 NRIP2Q9BQI9 281 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 TMEM208Q9BTX3 173 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 TAPBPLQ9BX59 468 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 DERL2Q9GZP9 239 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 ARL6Q9H0F7 186 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 MFSD1Q9H3U5 465 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms