RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 NSDHLQ15738 373 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 NRF1Q16656 503 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 IMPG1Q17R60 797 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 C5orf64Q2M2E5 130 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TMEM249Q2WGJ8 235 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 PAGE3Q5JUK9 113 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TPTE2P1Q5T6R2 138 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CPTPQ5TA50 214 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 GFI1BQ5VTD9 330 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 NCCRP1Q6ZVX7 275 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 PRSS41Q7RTY9 318 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 PEX26Q7Z412 305 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 OAFQ86UD1 273 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TRAPPC5Q8IUR0 188 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TBC1D19Q8N5T2 526 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR8G5Q8NG78 346 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR6Q1Q8NGQ2 317 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR1N2Q8NGR9 330 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR51F2Q8NH61 342 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 PPTC7Q8NI37 304 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 DTD1Q8TEA8 209 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 GEMIN6Q8WXD5 167 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 RORBQ92753 470 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 FGF14Q92915 247 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 UCN3Q969E3 161 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TMEM54Q969K7 222 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SNF8Q96H20 258 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 MCEEQ96PE7 176 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ARHGDIGQ99819 225 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 EBNA1BP2Q99848 306 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 KRTAP1-5Q9BYS1 174 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 UBXN6Q9BZV1 441 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 NEUROG2Q9H2A3 272 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CLMPQ9H6B4 373 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TMEM38AQ9H6F2 299 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 RPF2Q9H7B2 306 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF442Q9H7R0 627 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 UBE2ZQ9H832 354 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZDHHC11Q9H8X9 412 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SH2D2AQ9NP31 389 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 EXOSC4Q9NPD3 245 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ASCL3Q9NQ33 180 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CTPS2Q9NRF8 586 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CISHQ9NSE2 258 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 VSIG4Q9Y279 399 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SNX24Q9Y343 169 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TBL2Q9Y4P3 447 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 C2orf16Q68DN1 1984 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 KIAA0100Q14667 2235 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 PDE4DIPQ5VU43 2346 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 LRRK1Q38SD2 2015 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SCN8AQ9UQD0 1980 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 HELZP42694 1942 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 A0A0B4J2A0 478 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 IGKV6-21A0A0C4DH24 114 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 A0A0J9YXY3 114 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ISPDA4D126 451 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR5K4A6NMS3 321 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 H3BQF6 201 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 TNFSF11O14788 317 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 FABP7O15540 132 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GATCO43716 136 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 HPGDSO60760 199 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 DPM1O60762 260 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CRLF1O75462 422 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 PIAS1O75925 651 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SRP72O76094 671 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 AIFM1O95831 613 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 TIMP1P01033 207 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 IFNA14P01570 189 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 IGHV3-48P01763 117 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 RLN2P04090 185 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ARG1P05089 322 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CALB1P05937 261 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GP1BAP07359 652 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CSF3P09919 207 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR4E1P0C645 316 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GKN3PP0CG01 181 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CTRB1P17538 263 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CSNK2A2P19784 350 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CELP19835 753 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 PRPS1L1P21108 318 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SERPINB5P36952 375 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 RBMXP38159 391 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 NBL1P41271 181 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 MAGEA12P43365 314 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 OMPP47874 163 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 IDH2P48735 452 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 TUFMP49411 452 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GNG10P50151 68 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 NKX2-5P52952 324 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 AP2S1P53680 142 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 APOC4P55056 127 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ACTBP60709 375 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ACTG1P63261 375 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 PAFAH1B2P68402 229 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 HMGCS1Q01581 520 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ST3GAL4Q11206 333 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms