RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 BEND2Q8NDZ0 799 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 OR8J1Q8NGP2 316 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 OR2T27Q8NH04 317 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 UBE2FQ969M7 185 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 CENPNQ96H22 339 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-211ENST00000467464 PKIBQ9C010 78 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 RIBC2Q9H4K1 309 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 ENOPH1Q9UHY7 261 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 POLDIP2Q9Y2S7 368 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 VWFP04275 2813 aa9.74□□□□□ -0.85
PTPRF-211ENST00000467464 LOC107986453A0A1B0GWG9 222 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 ANKRD61A6NGH8 418 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 METTL15A6NJ78 407 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 SAC3D1A6NKF1 404 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 H3BNX3 289 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 J3QRE1 110 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 ZNF737O75373 536 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 SULT1C4O75897 302 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 ATP5HO75947 161 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 NXPH2O95156 264 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 CCL3L1P16619 93 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 PAX6P26367 422 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 RASSF2P50749 326 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 BMXP51813 675 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 ACTR3P61158 418 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 RPL31P62899 125 aaKnown RBP9.73□□□□□ -0.85
PTPRF-211ENST00000467464 TMED1Q13445 227 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 ODF4Q2M2E3 257 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 TCF23Q7RTU1 214 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 OR5D13Q8NGL4 314 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 OR5R1Q8NH85 324 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 PPP1R35Q8TAP8 253 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 TRMT10AQ8TBZ6 339 aaKnown RBP9.73□□□□□ -0.85
PTPRF-211ENST00000467464 PIFOQ8TCI5 191 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 CHST5Q9GZS9 411 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 MEGF9Q9H1U4 602 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 MTCH1Q9NZJ7 389 aa9.73□□□□□ -0.85
PTPRF-211ENST00000467464 SF3B6Q9Y3B4 125 aaKnown RBP9.73□□□□□ -0.85
PTPRF-211ENST00000467464 H0YAE9 185 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 H3BSH0 61 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 K7N7A8 449 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 SLC1A7O00341 560 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 ANGPTL7O43827 346 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 TK1P04183 234 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 ALPLP05186 524 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 KRT8P05787 483 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 CAPZA1P52907 286 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 BLMHQ13867 455 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 LDLRAD2Q5SZI1 272 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 DHRS7BQ6IAN0 325 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-211ENST00000467464 OR10H4Q8NGA5 316 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 OR4M1Q8NGD0 313 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 PYDC1Q8WXC3 89 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 FAM234AQ9H0X4 552 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 IL36RNQ9UBH0 155 aa9.72□□□□□ -0.85
PTPRF-211ENST00000467464 DOCK11Q5JSL3 2073 aa9.71□□□□□ -0.85
PTPRF-211ENST00000467464 IGKV1-9A0A0C4DH69 117 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 FAM230AA0A1W2PPH8 454 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 BTBD17A6NE02 478 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 FAM90A8PA6NJQ4 464 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 C17orf98A8MV24 154 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 H3BUX3 64 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 SYT7O43581 403 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 ENTPD6O75354 484 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 PAHP00439 452 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 TGFBR2P37173 567 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 AANATQ16613 207 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 TP53I3Q53FA7 332 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 SLC25A30Q5SVS4 291 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 SLC35E4Q6ICL7 350 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 RDH10Q8IZV5 341 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 DYNAPQ8N1N2 210 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 CCDC54Q8NEL0 328 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 ADAT3Q96EY9 351 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-211ENST00000467464 HRASLS5Q96KN8 279 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 CEP19Q96LK0 163 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 RBM4BQ9BQ04 359 aaKnown RBP9.71□□□□□ -0.86
PTPRF-211ENST00000467464 USE1Q9NZ43 259 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 OR14J1Q9UGF5 321 aa9.71□□□□□ -0.86
PTPRF-211ENST00000467464 TMEM82A0PJX8 343 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 ODF3BA8MYP8 253 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 EI24O14681 340 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 TIMM23O14925 209 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 CHST1O43916 411 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 TSPAN15O95858 294 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 UBCP0CG48 685 aaKnown RBP9.7□□□□□ -0.86
PTPRF-211ENST00000467464 PIPP12273 146 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-211ENST00000467464 EFNB2P52799 333 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 NANOS3P60323 173 aaKnown RBP9.7□□□□□ -0.86
PTPRF-211ENST00000467464 DEFA6Q01524 100 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 COL10A1Q03692 680 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 FDX2Q6P4F2 183 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 ZNF782Q6ZMW2 699 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-211ENST00000467464 LHFPL4Q7Z7J7 247 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 OR2G2Q8NGZ5 317 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 SLAMF9Q96A28 289 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 C10orf35Q96D05 121 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 SSX3Q99909 188 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 PPA2Q9H2U2 334 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 MMP27Q9H306 513 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms