RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 BCL2L14Q9BZR8 327 aa3.69□□□□□ -1.82
TM9SF3-202ENST00000443638 EXOSC4Q9NPD3 245 aaKnown RBP3.69□□□□□ -1.82
TM9SF3-202ENST00000443638 FGFR1OP2Q9NVK5 253 aa3.69□□□□□ -1.82
TM9SF3-202ENST00000443638 COMMD9Q9P000 198 aa3.69□□□□□ -1.82
TM9SF3-202ENST00000443638 PAK5Q9P286 719 aa3.69□□□□□ -1.82
TM9SF3-202ENST00000443638 C9orf84Q5VXU9 1444 aa3.69□□□□□ -1.82
TM9SF3-202ENST00000443638 ABCC11Q96J66 1382 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 KRBOX1C9JBD0 128 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 M0R036 132 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 LINC01565O15544 149 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 CD5LO43866 347 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 LYPLA2O95372 231 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 APOEP02649 317 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 CDK1P06493 297 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 ZNF883P0CG24 379 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 APLNRP35414 380 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 DRD3P35462 400 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 TALDO1P37837 337 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 NMUP48645 174 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 ERFP50548 548 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 TIMM10P62072 90 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 ARG2P78540 354 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 GINS1Q14691 196 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 HLA-DRB5Q30154 266 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 TSPO2Q5TGU0 170 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 CCNYL1Q8N7R7 359 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 TTLQ8NG68 377 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 CASTOR1Q8WTX7 329 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 CCL17Q92583 94 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 PTX4Q96A99 478 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 CLDN23Q96B33 292 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 SLC35E1Q96K37 410 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 OR2M4Q96R27 311 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 ZNF649Q9BS31 505 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 FAAP24Q9BTP7 215 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 TAPBPLQ9BX59 468 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 SLC22A4Q9H015 551 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 PLEKHF2Q9H8W4 249 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 DEC1Q9P2X7 70 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 SLC22A13Q9Y226 551 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 RIMBP3CA6NJZ7 1639 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 RIMBP3BA6NNM3 1639 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 RIMBP3Q9UFD9 1639 aa3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 MN1Q10571 1320 aaPredicted RBP3.68□□□□□ -1.82
TM9SF3-202ENST00000443638 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 IGKV6D-21A0A0A0MT36 114 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 CCDC22O60826 627 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 SS18L1O75177 396 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 GABARAPO95166 117 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 INSP01308 110 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 ISG15P05161 165 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 TAC1P20366 129 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 IFNGR2P38484 337 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 IDH2P48735 452 aaKnown RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 PSMB2P49721 201 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 B2MP61769 119 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 LSM6P62312 80 aaKnown RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 REEP5Q00765 189 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 NAB1Q13506 487 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 PNOCQ13519 176 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 PMVKQ15126 192 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 IRF4Q15306 451 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 IL17AQ16552 155 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 Q499Y3 187 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 ZNF658BQ4V348 819 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 CLEC12AQ5QGZ9 265 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 OGFRL1Q5TC84 451 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 ZNF544Q6NX49 715 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 TTC33Q6PID6 262 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 CD200R1LQ6Q8B3 271 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 SLC13A5Q86YT5 568 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 DRAM1Q8N682 238 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 HAVCR2Q8TDQ0 301 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 DCAKDQ8WVC6 231 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 SRSF12Q8WXF0 261 aaKnown RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 PRAP1Q96NZ9 151 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 OR4K3Q96R72 315 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 TIMM17AQ99595 171 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 UBXN6Q9BZV1 441 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 GFRA4Q9GZZ7 299 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 MS4A6AQ9H2W1 248 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 CDC42EP4Q9H3Q1 356 aaKnown RBP3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 GUCA1BQ9UMX6 200 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 ADAMTSL3P82987 1691 aa3.67□□□□□ -1.82
TM9SF3-202ENST00000443638 IGHV3-66A0A0C4DH42 116 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 TMEM114B3SHH9 223 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 MANBAO00462 879 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 FFAR1O14842 300 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 SSNA1O43805 119 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 PDCD6O75340 191 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 REM1O75628 298 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 SERPINB7O75635 380 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 EPPINO95925 133 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 IGLV2-8P01709 118 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 RPS17P08708 135 aaKnown RBP3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 PSMB9P28065 219 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 HBG1P69891 147 aa3.66□□□□□ -1.82
TM9SF3-202ENST00000443638 HBG2P69892 147 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms