RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PCK2Q16822 640 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PLPPR5Q32ZL2 321 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ABCA11PQ4W5N1 156 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 KRTCAP3Q53RY4 240 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ALG10Q5BKT4 473 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 LRRC10Q5BKY1 277 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRPL54Q6P161 138 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 C12orf54Q6X4T0 127 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 Q6ZN92 141 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 C19orf35Q6ZS72 473 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ABHD12BQ7Z5M8 362 aaPredicted RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 VASH2Q86V25 355 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 FAM219AQ8IW50 185 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 C7orf61Q8IZ16 206 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 NRSN1Q8IZ57 195 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SIGLECL1Q8N7X8 197 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 BMPERQ8N8U9 685 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 CDRT4Q8N9R6 151 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR5D18Q8NGL1 313 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF480Q8WV37 535 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 FAM3CQ92520 227 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PSMF1Q92530 271 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 TOMM40LQ969M1 308 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ADIPOR1Q96A54 375 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ARRDC3Q96B67 414 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC25A44Q96H78 314 aaPredicted RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 HHIPL1Q96JK4 782 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ALKBH3Q96Q83 286 aaPredicted RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRSS27Q9BQR3 290 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 TXNDC17Q9BRA2 123 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 LMF2Q9BU23 707 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 G6PC3Q9BUM1 346 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR10A5Q9H207 317 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PLEKHF2Q9H8W4 249 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 TUBG2Q9NRH3 451 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SPANXA1Q9NS26 97 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 FRRS1LQ9P0K9 344 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRSS50Q9UI38 385 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 GJD2Q9UKL4 321 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC5A6Q9Y289 635 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRPS28Q9Y2Q9 187 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 IER3IP1Q9Y5U9 82 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 LIPGQ9Y5X9 500 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 TNS1Q9HBL0 1735 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CHD5Q8TDI0 1954 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 DNAJC25-GNG10A0A024R161 153 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TRAV8-7A0A075B6U6 113 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TRAV27A0A087WT01 109 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A0A6YYD5 115 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A0B4J2E0 115 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A0G2JN53 185 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A1B0GX12 115 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 ARL5CA6NH57 179 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PROB1E7EW31 1015 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CCL25O15444 150 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRICKLE3O43900 615 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF217O75362 1048 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 GJB3O75712 270 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR6A2O95222 327 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 KLF8O95600 359 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 SCGB1D2O95969 90 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PDGFBP01127 241 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PFN1P07737 140 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR10J4P0C629 311 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 IL9P15248 144 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 IGFBP3P17936 291 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 S100GP29377 79 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CMPK1P30085 196 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CEACAM8P31997 349 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PPP1CCP36873 323 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CEACAM3P40198 252 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 APOBEC1P41238 236 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 ACAA2P42765 397 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CAPZBP47756 277 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPBWR2P48146 333 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CDC34P49427 236 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PSMB3P49720 205 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 EFNB2P52799 333 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRRX1P54821 245 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 RAB38P57729 211 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 NANOS3P60323 173 aaKnown RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 B4GALNT1Q00973 533 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 ROM1Q03395 351 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 FUT5Q11128 374 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 ADIRFQ15847 76 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CDKN3Q16667 212 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 DUSP5Q16690 384 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 ITPRIPL2Q3MIP1 535 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 SAMD13Q5VXD3 122 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 MFSD12Q6NUT3 480 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 FAM71F2Q6NXP2 309 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC48A1Q6P1K1 146 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM220Q6QAJ8 160 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 CENPVQ7Z7K6 275 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 LHFPL1Q86WI0 220 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF280BQ86YH2 543 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 LRRC25Q8N386 305 aaPredicted RBP4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM130Q8N3G9 435 aa4.95□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM156Q8N614 296 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms