RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CCDC36Q8IYA8 594 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 BATF2Q8N1L9 274 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 ADAD2Q8NCV1 583 aaKnown RBP17.82■□□□□ 0.44
USP39-203ENST00000409470 OR5AP2Q8NGF4 316 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 HPSE2Q8WWQ2 592 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 PPA2Q9H2U2 334 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 FN3KRPQ9HA64 309 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 AK3Q9UIJ7 227 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 ANKRD30BLA7E2S9 258 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 AHRRA9YTQ3 701 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 KIR2DL2P43627 348 aaPredicted RBP17.81■□□□□ 0.44
USP39-203ENST00000409470 IL13RA1P78552 427 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 MRPL49Q13405 166 aaKnown RBP17.81■□□□□ 0.44
USP39-203ENST00000409470 OR2A2Q6IF42 318 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 FAHD2BQ6P2I3 314 aaPredicted RBP17.81■□□□□ 0.44
USP39-203ENST00000409470 OR10AD1Q8NGE0 317 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 FAHD2AQ96GK7 314 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 CMSS1Q9BQ75 279 aaKnown RBP17.81■□□□□ 0.44
USP39-203ENST00000409470 FGF23Q9GZV9 251 aaPredicted RBP17.81■□□□□ 0.44
USP39-203ENST00000409470 SLC23A1Q9UHI7 598 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 C9orf170A2RU37 121 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 ZNF732B4DXR9 585 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 TPOP07202 933 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 VAMP1P23763 118 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 IL32P24001 234 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 NPBWR2P48146 333 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 IDH3GP51553 393 aaPredicted RBP17.81■□□□□ 0.44
USP39-203ENST00000409470 RBM11P57052 281 aaKnown RBP17.81■□□□□ 0.44
USP39-203ENST00000409470 VWA1Q6PCB0 445 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 OR6K3Q8NGY3 331 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 FAM210AQ96ND0 272 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 SULT4A1Q9BR01 284 aa17.81■□□□□ 0.44
USP39-203ENST00000409470 PRRC2CQ9Y520 2896 aaKnown RBP17.8■□□□□ 0.44
USP39-203ENST00000409470 CFAP47Q6ZTR5 3102 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 PROB1E7EW31 1015 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 CNOT4O95628 575 aaKnown RBP17.8■□□□□ 0.44
USP39-203ENST00000409470 CELA3BP08861 270 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 ZNF14P17017 642 aaPredicted RBP17.8■□□□□ 0.44
USP39-203ENST00000409470 SSTR2P30874 369 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 TAS2R31P59538 309 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 ARPC4P59998 168 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 TSC22D1Q15714 1073 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 GABRA6Q16445 453 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 SPATA46Q5T0L3 261 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 BRICD5Q6PL45 260 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 OR13G1Q8NGZ3 307 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 SLAMF9Q96A28 289 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 SCGB3A2Q96PL1 93 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 CDH20Q9HBT6 801 aa17.8■□□□□ 0.44
USP39-203ENST00000409470 PDCD1Q15116 288 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 MYPOPQ86VE0 399 aaPredicted RBP17.79■□□□□ 0.44
USP39-203ENST00000409470 OR5A2Q8NGI9 324 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 EDARQ9UNE0 448 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 IL2RAP01589 272 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 BCL3P20749 454 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 HOXC12P31275 282 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 FOXF2Q12947 444 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 OR2T2Q6IF00 324 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 LIN54Q6MZP7 749 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 Q6ZS92 163 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 OVCH2Q7RTZ1 564 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 OR8H1Q8NGG4 311 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 CASTOR1Q8WTX7 329 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 ASB13Q8WXK3 278 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 PHB2Q99623 299 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 GPR132Q9UNW8 380 aa17.79■□□□□ 0.44
USP39-203ENST00000409470 IGKV1D-8A0A087WSZ0 117 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 PDCD6O75340 191 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 OR7C1O76099 320 aaPredicted RBP17.78■□□□□ 0.44
USP39-203ENST00000409470 RGS11O94810 467 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 PDGFAP04085 211 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 FPR2P25090 351 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 PER3P56645 1201 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 INO80CQ6PI98 192 aaPredicted RBP17.78■□□□□ 0.44
USP39-203ENST00000409470 ZNF767PQ75MW2 155 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 SAXO1Q8IYX7 474 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 DYRK2Q92630 601 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 MPC1Q9Y5U8 109 aa17.78■□□□□ 0.44
USP39-203ENST00000409470 PTPRZ1P23471 2315 aaPredicted RBP17.78■□□□□ 0.44
USP39-203ENST00000409470 PLSCR5A0PG75 271 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 LILRA1O75019 489 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 DTYMKP23919 212 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 EIF2S3P41091 472 aaKnown RBP17.77■□□□□ 0.44
USP39-203ENST00000409470 DHODHQ02127 395 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 NSUN5P2Q63ZY6 315 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 LHFPL1Q86WI0 220 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 MITD1Q8WV92 249 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 OR5P3Q8WZ94 311 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 TMPRSS13Q9BYE2 586 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 C5orf66Q9H5L9 145 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 ANXA10Q9UJ72 324 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 OSGIN2Q9Y236 505 aa17.77■□□□□ 0.44
USP39-203ENST00000409470 CEACAM18A8MTB9 384 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 FCGR3AP08637 254 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 OPRM1P35372 400 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 BAMBIQ13145 260 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 GRK1Q15835 563 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 TMEM128Q5BJH2 165 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 LY6G6FQ5SQ64 297 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 AADACL3Q5VUY0 350 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms