RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CTLA4P16410 223 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 EIF4EBP2Q13542 120 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 UNQ9370/PRO34162Q6UXP9 181 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 PRSS45Q7RTY3 260 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR4F17Q8NGA8 305 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR8B12Q8NGG6 310 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR13C8Q8NGS7 320 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR4F5Q8NH21 305 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 FAM213BQ8TBF2 198 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR4F4Q96R69 305 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 UQCC2Q9BRT2 126 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 DCTN5Q9BTE1 182 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 FGF20Q9NP95 211 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 UGT2A1Q9Y4X1 527 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR6C68A6NDL8 312 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 FOXH1O75593 365 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TIAF1O95411 115 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 PF4V1P10720 104 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ACAA2P42765 397 aaKnown RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 PIGPP57054 158 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 MESTQ5EB52 335 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ZBTB37Q5TC79 503 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 DBX2Q6ZNG2 339 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TGIF2LYQ8IUE0 185 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TGIF2LXQ8IUE1 241 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 VSTM2AQ8TAG5 236 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 C10orf35Q96D05 121 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ADGRG7Q96K78 797 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF75AQ96N20 296 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 JMJD8Q96S16 334 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 COL11A1P12107 1806 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SULT1C2O00338 296 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 FABP7O15540 132 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SLC25A6P12236 298 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 HRH1P35367 487 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 PAFAH1B2P68402 229 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 S100A12P80511 92 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR5I1Q13606 314 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TSPO2Q5TGU0 170 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ELP2Q6IA86 826 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 C20orf196Q8IYI0 205 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF596Q8TC21 504 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF714Q96N38 554 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR2J1Q9GZK6 312 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 WIPI2Q9Y4P8 454 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 POMT1Q9Y6A1 747 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 IFITM5A6NNB3 132 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 CTDSP2O14595 271 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 NAT2P11245 290 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 DAOP14920 347 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF26P17031 533 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 LPAR6P43657 344 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 COL10A1Q03692 680 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SYT6Q5T7P8 510 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 DCAF12L2Q5VW00 463 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 MUC15Q8N387 334 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 FAM168AQ92567 244 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF385AQ96PM9 386 aaKnown RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ATP5SQ99766 215 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 IL20Q9NYY1 176 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 LOC105371242A0A075B767 164 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 C19orf67A6NJJ6 358 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 F8W036 122 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 J3QT63 122 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TO15178 435 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 LANCL1O43813 399 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TSPAN2O60636 221 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 IGHV3-13P01766 116 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 IGHV3-7P01780 117 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SULT1A3P0DMM9 295 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SULT1A4P0DMN0 295 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 RRASP10301 218 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 PTBP1P26599 531 aaKnown RBP eCLIP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 LINC00596Q86U02 117 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 OR8U1Q8NH10 309 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TMUB1Q9BVT8 246 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 CDCA4Q9BXL8 241 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SMCO4Q9NRQ5 59 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SLC6A13Q9NSD5 602 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 SLC35D1Q9NTN3 355 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF225Q9UK10 706 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 PCDHGA9Q9Y5G4 932 aaKnown RBP4.41□□□□□ -1.7
SCN3A-203ENST00000409101 PARP14Q460N5 1801 aa4.41□□□□□ -1.7
SCN3A-203ENST00000409101 TXNL1O43396 289 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 NDUFA2O43678 99 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 UPK3AO75631 287 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 HPNP05981 417 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 MCCD1P59942 119 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-203ENST00000409101 C12orf73Q69YU5 71 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 TMEM179BQ7Z7N9 219 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 LSMEM1Q8N8F7 131 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 ZNF418Q8TF45 676 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-203ENST00000409101 SLC7A6Q92536 515 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 SLC25A46Q96AG3 418 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 ZG16BQ96DA0 208 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 OR2V2Q96R30 315 aa4.4□□□□□ -1.7
SCN3A-203ENST00000409101 COL25A1Q9BXS0 654 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-203ENST00000409101 RAB18Q9NP72 206 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms