RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SF3B6Q9Y3B4 125 aaKnown RBP13.49□□□□□ -0.25
PTPRK-208ENST00000392449 F8VVB4 439 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 F8VWA3 439 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 SLC1A7O00341 560 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 TGFBR2P37173 567 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 ZNF782Q6ZMW2 699 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-208ENST00000392449 ZNF573Q86YE8 665 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 C1QL4Q86Z23 238 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 YIPF7Q8N8F6 280 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 OR5R1Q8NH85 324 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 FAM110DQ8TAY7 271 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-208ENST00000392449 UBE2FQ969M7 185 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 CIB1Q99828 191 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 MOB1AQ9H8S9 216 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 FAM53CQ9NYF3 392 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 SNX5Q9Y5X3 404 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 FAM230AA0A1W2PPH8 454 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 A0A1W2PQL4 384 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-208ENST00000392449 MEGF11A6BM72 1044 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 DLGAP1O14490 977 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 OCLNQ16625 522 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 ZNF561Q8N587 486 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 OR2T27Q8NH04 317 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 HES4Q9HCC6 221 aa13.48□□□□□ -0.25
PTPRK-208ENST00000392449 TET2Q6N021 2002 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-208ENST00000392449 IGKV1-27A0A075B6S5 117 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 DYNC1I1O14576 645 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 NOS1APO75052 506 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-208ENST00000392449 MPZP25189 248 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 GABRA5P31644 462 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 BNIP1Q12981 228 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 LRRC75BQ2VPJ9 315 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 PLA1AQ53H76 456 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 LHFPL4Q7Z7J7 247 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 ZDHHC13Q8IUH4 622 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 GID4Q8IVV7 300 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 DYNAPQ8N1N2 210 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 C11orf44Q8N8P7 122 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 GABARAPL1Q9H0R8 117 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 FOXJ3Q9UPW0 622 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 POLDIP2Q9Y2S7 368 aa13.47□□□□□ -0.25
PTPRK-208ENST00000392449 CHST1O43916 411 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 TK1P04183 234 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 KRT8P05787 483 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 CCL1P22362 96 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 FASP25445 335 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 ERVK11-1P61568 191 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 COL10A1Q03692 680 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 UBE2V2Q15819 145 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 Q6ZSR3 168 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 CATSPERDQ86XM0 798 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 ASCC1Q8N9N2 400 aaKnown RBP13.46□□□□□ -0.25
PTPRK-208ENST00000392449 OR10H4Q8NGA5 316 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 ITFG2Q969R8 447 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 SLAMF9Q96A28 289 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 MNTQ99583 582 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 RIBC2Q9H4K1 309 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 AP4S1Q9Y587 144 aa13.46□□□□□ -0.25
PTPRK-208ENST00000392449 DSCAML1Q8TD84 2053 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 DLX6P56179 175 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 ACTR3P61158 418 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 C1orf146Q5VVC0 180 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 CRIP3Q6Q6R5 217 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 RDH10Q8IZV5 341 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 PRSS35Q8N3Z0 413 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 PIFOQ8TCI5 191 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 MEGF9Q9H1U4 602 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 PLEKHA1Q9HB21 404 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 USE1Q9NZ43 259 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 MTCH1Q9NZJ7 389 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 IL36RNQ9UBH0 155 aa13.45□□□□□ -0.26
PTPRK-208ENST00000392449 SYT7O43581 403 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 HTR1FP30939 366 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 RAB13P51153 203 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 IL24Q13007 206 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 LDLRAD2Q5SZI1 272 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 HEXA-AS1Q9H8Q6 139 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 FBLN5Q9UBX5 448 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 WARS2Q9UGM6 360 aaKnown RBP13.44□□□□□ -0.26
PTPRK-208ENST00000392449 OAZ3Q9UMX2 235 aa13.44□□□□□ -0.26
PTPRK-208ENST00000392449 METTL15A6NJ78 407 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 SAC3D1A6NKF1 404 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 DHRS7CA6NNS2 312 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 K7N7A8 449 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 ZNF737O75373 536 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 CALCBP10092 127 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 JUNBP17275 347 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-208ENST00000392449 KIR3DL2P43630 455 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 EFNB2P52799 333 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 EDDM3BP56851 147 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 HABP2Q14520 560 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-208ENST00000392449 TP53I3Q53FA7 332 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 TCF23Q7RTU1 214 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 RNF166Q96A37 237 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-208ENST00000392449 EME1Q96AY2 570 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 NKX3-1Q99801 234 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-208ENST00000392449 PKIBQ9C010 78 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 FAM234AQ9H0X4 552 aa13.43□□□□□ -0.26
PTPRK-208ENST00000392449 LOC107986453A0A1B0GWG9 222 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 A0A1W2PPH5 198 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms