RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 CNN1P51911 297 aaKnown RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 FBXO8Q9NRD0 319 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 PRR19A6NJB7 356 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 TSTD3H0UI37 97 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 SMLR1H3BR10 107 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 OIP5O43482 229 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 PDGFAP04085 211 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 PTGFRP43088 359 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 TCAPO15273 167 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 SNRPNP63162 240 aaKnown RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 ADAM5Q6NVV9 412 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 GMPPAQ96IJ6 420 aaPredicted RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 KIR2DS2P43631 304 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 OR13F1Q8NGS4 319 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 PCNPQ8WW12 178 aaKnown RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 OR51I2Q9H344 312 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 OR6C68A6NDL8 312 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 OR3A1P47881 315 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 PAFAH1B2P68402 229 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 CALHM3Q86XJ0 350 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 SPTBN2O15020 2390 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 TDRD15B5MCY1 1934 aaKnown RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 GAMTQ14353 236 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 KCNMB1Q16558 191 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 SH2D5Q6ZV89 423 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
LRRK1-201ENST00000388948 TTTY12Q9BZ98 90 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 RNF167Q9H6Y7 350 aa13.2□□□□□ -0.3
LRRK1-201ENST00000388948 CD1EP15812 388 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF26P17031 533 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 CALCRP30988 508 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 RAE1P78406 368 aaKnown RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 NECAP1Q8NC96 275 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 TINAGQ9UJW2 476 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 MPC1Q9Y5U8 109 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 EP300Q09472 2414 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 A0A1B0GTL3 188 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 ARRDC5A6NEK1 342 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 RPL12P30050 165 aaKnown RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 A0A1W2PQF6 199 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 CDC20Q12834 499 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 OR6X1Q8NH79 312 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 ESPL1Q14674 2120 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 LANCL1O43813 399 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 FAAP24Q9BTP7 215 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 SIRT3Q9NTG7 399 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 SIGLEC7Q9Y286 467 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 SLC25A1P53007 311 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 FABP5Q01469 135 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 TOR2AQ5JU69 321 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF787Q6DD87 383 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 SOX15O60248 233 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF354AO60765 605 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 SCO1O75880 301 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 SELENOPP49908 381 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 H3F3AP84243 136 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 FNDC7Q5VTL7 733 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 VSTM2LQ96N03 204 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF230Q9UIE0 474 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-201ENST00000388948 PCOLCE2Q9UKZ9 415 aa13.19□□□□□ -0.3
LRRK1-201ENST00000388948 WNT1P04628 370 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 MLF1P58340 268 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 DOCK3Q8IZD9 2030 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 NTF3P20783 257 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 LIMK1P53667 647 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 LYZP61626 148 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 TGIF1Q15583 401 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 CDH26Q8IXH8 852 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 BLNKQ8WV28 456 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 TSPAN32Q96QS1 320 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 SF3B5Q9BWJ5 86 aaKnown RBP13.18□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF665Q9H7R5 613 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 UCK1Q9HA47 277 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 C20orf141Q9NUB4 165 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 TAAR5O14804 337 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 SMAD7O15105 426 aaKnown RBP13.18□□□□□ -0.3
LRRK1-201ENST00000388948 PSMB6P28072 239 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 ISL1P61371 349 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 TAGLNQ01995 201 aaKnown RBP13.18□□□□□ -0.3
LRRK1-201ENST00000388948 OR1A1Q9P1Q5 309 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF727A8MUV8 499 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 ZNF17P17021 662 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 LSM2Q9Y333 95 aaKnown RBP13.18□□□□□ -0.3
LRRK1-201ENST00000388948 AKAP6Q13023 2319 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 GP1BAP07359 652 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 HOXD4P09016 255 aaPredicted RBP13.18□□□□□ -0.3
LRRK1-201ENST00000388948 LPAR6P43657 344 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 ATP5J2P56134 94 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 ECSCRQ19T08 205 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 DGAT2L6Q6ZPD8 337 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 CCDC190Q86UF4 302 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 CNOT1A5YKK6 2376 aaKnown RBP13.18□□□□□ -0.3
LRRK1-201ENST00000388948 UBE2MP61081 183 aaKnown RBP13.18□□□□□ -0.3
LRRK1-201ENST00000388948 SPINK9Q5DT21 86 aa13.18□□□□□ -0.3
LRRK1-201ENST00000388948 DERL3Q96Q80 235 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms