RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 J3QW42 95 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 AKR7A2O43488 359 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 CA11O75493 328 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 IFNA6P05013 189 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 ERP29P30040 261 aaKnown RBP17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 PPP1CBP62140 327 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 C1orf185Q5T7R7 199 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 ATPAF1Q5TC12 328 aaPredicted RBP17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF324BQ6AW86 544 aaPredicted RBP17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 C3P1Q6ZMU1 363 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 HOGA1Q86XE5 327 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 OR5P3Q8WZ94 311 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 MRGPRFQ96AM1 343 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 FAAP24Q9BTP7 215 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 HSF4Q9ULV5 492 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 BOLA1Q9Y3E2 137 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 RP1L1Q8IWN7 2480 aaPredicted RBP17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 IL2RAP01589 272 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 IGKV3-15P01624 115 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 CRHP06850 196 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 PTGER4P35408 488 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 ZMYND11Q15326 602 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 FBXW12Q6X9E4 464 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 TMED4Q7Z7H5 227 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 BATF2Q8N1L9 274 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 OR2J1Q9GZK6 312 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 MPC1Q9Y5U8 109 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 RRP8O43159 456 aaKnown RBP17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 ERVS71-1P61550 626 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 P2RY6Q15077 328 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 PPA1Q15181 289 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 C4orf46Q504U0 113 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 BEND4Q6ZU67 534 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 MUC20Q8N307 709 aaPredicted RBP17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 FAM57AQ8TBR7 257 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 MAFIPQ8WZ33 124 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 EMG1Q92979 244 aaKnown RBP17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 TRAF4Q9BUZ4 470 aaPredicted RBP17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF436Q9C0F3 470 aaPredicted RBP17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 VSIG4Q9Y279 399 aa17.03■□□□□ 0.32
PDLIM5-205ENST00000380180 OR2AT4A6NND4 320 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 AMY2BP19961 511 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 CHATP28329 748 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 SNU13P55769 128 aaKnown RBP17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 UCP2P55851 309 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 ACTBL2Q562R1 376 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 VAX1Q5SQQ9 334 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 SPICQ8N5J4 248 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 OR10AD1Q8NGE0 317 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 CCDC107Q8WV48 283 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 SLAMF9Q96A28 289 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 HDHD3Q9BSH5 251 aaPredicted RBP17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 PLSCR3Q9NRY6 295 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 MGAT4CQ9UBM8 478 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 NPTNQ9Y639 398 aa17.02■□□□□ 0.32
PDLIM5-205ENST00000380180 SPTBN4Q9H254 2564 aa17.02■□□□□ 0.31
PDLIM5-205ENST00000380180 UBE2QL1A1L167 161 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 OR4E1P0C645 316 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 CA6P23280 308 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 TIMP3P35625 211 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 RBM11P57052 281 aaKnown RBP17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 IFITM2Q01629 132 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 PDCD1Q15116 288 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 SAXO1Q8IYX7 474 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 Q8NA96 180 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 Q8NFD4 153 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 DLL4Q9NR61 685 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 ZNF701Q9NV72 531 aaPredicted RBP17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 AK3Q9UIJ7 227 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 BCL3P20749 454 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 BRICD5Q6PL45 260 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 C17orf107Q6ZR85 190 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 BHLHA15Q7RTS1 189 aaPredicted RBP17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 C17orf78Q8N4C9 275 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 CISD2Q8N5K1 135 aaKnown RBP17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 OR5H2Q8NGV7 314 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 SLC25A40Q8TBP6 338 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 SULT4A1Q9BR01 284 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 MYOZ1Q9NP98 299 aaPredicted RBP17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 CA10Q9NS85 328 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 MTCH1Q9NZJ7 389 aa17.01■□□□□ 0.31
PDLIM5-205ENST00000380180 BSNQ9UPA5 3926 aa17■□□□□ 0.31
PDLIM5-205ENST00000380180 F8VVB4 439 aa17■□□□□ 0.31
PDLIM5-205ENST00000380180 F8VWA3 439 aa17■□□□□ 0.31
PDLIM5-205ENST00000380180 UBE2MP61081 183 aaKnown RBP17■□□□□ 0.31
PDLIM5-205ENST00000380180 EIF2S3LQ2VIR3 472 aaKnown RBP17■□□□□ 0.31
PDLIM5-205ENST00000380180 NLRC3Q7RTR2 1065 aa17■□□□□ 0.31
PDLIM5-205ENST00000380180 TMEM200AQ86VY9 491 aa17■□□□□ 0.31
PDLIM5-205ENST00000380180 OR1J1Q8NGS3 322 aa17■□□□□ 0.31
PDLIM5-205ENST00000380180 HYLS1Q96M11 299 aa17■□□□□ 0.31
PDLIM5-205ENST00000380180 PAIP2BQ9ULR5 123 aaKnown RBP17■□□□□ 0.31
PDLIM5-205ENST00000380180 ZNF35P13682 527 aa16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 OR3A3P47888 321 aa16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 DAZAP2Q15038 168 aaPredicted RBP16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 CDK10Q15131 360 aa16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 ELP2Q6IA86 826 aa16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 MKXQ8IYA7 352 aa16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 ARRDC1Q8N5I2 433 aa16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 ZDHHC22Q8N966 263 aa16.99■□□□□ 0.31
PDLIM5-205ENST00000380180 TERB2Q8NHR7 220 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms