RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 OR52R1Q8NGF1 315 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 MAGEE2Q8TD90 523 aaPredicted RBP4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 ACTRT1Q8TDG2 376 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 TM4SF18Q96CE8 201 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 COL21A1Q96P44 957 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 HBEGFQ99075 208 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 GPR22Q99680 433 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 PELOQ9BRX2 385 aaKnown RBP4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 NAT9Q9BTE0 207 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 DSN1Q9H410 356 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 RBKSQ9H477 322 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 REEP4Q9H6H4 257 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 MED11Q9P086 117 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 DCDC2Q9UHG0 476 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 PKD1L1Q8TDX9 2849 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 PRR14LQ5THK1 2151 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 NCKAP5O14513 1909 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 TGP01266 2768 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 TRRAPQ9Y4A5 3859 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 TCRBV9S1A1TA0A576 114 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 DPRXA6NFQ7 191 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 FAM159BA6NKW6 160 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZFP92A6NM28 416 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 H0Y8G0 127 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 PGRMC1O00264 195 aaKnown RBP4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 DCTN6O00399 190 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 ACOX3O15254 700 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 CDH16O75309 829 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 REM1O75628 298 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 STAMBPO95630 424 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 IGHV3-48P01763 117 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 NPR2P20594 1047 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 SERPINB1P30740 379 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 CALCRP30988 508 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 TMED10P49755 219 aaKnown RBP4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 DSCR4P56555 118 aaPredicted RBP4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 ATP6V0D1P61421 351 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 BST1Q10588 318 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 PDIA2Q13087 525 aaKnown RBP4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 PON3Q15166 354 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 PPP1R7Q15435 360 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 TMEM249Q2WGJ8 235 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 NCMAPQ5T1S8 102 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR2G6Q5TZ20 316 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR52E8Q6IFG1 317 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 RPS27LQ71UM5 84 aaKnown RBP4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 PGAP1Q75T13 922 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 CDH26Q8IXH8 852 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 CEND1Q8N111 149 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 PDIK1LQ8N165 341 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 GABRG1Q8N1C3 465 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR52H1Q8NGJ2 320 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 FAM110BQ8TC76 370 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 KCTD4Q8WVF5 259 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 CHCHD10Q8WYQ3 142 aaPredicted RBP4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 TUBGCP3Q96CW5 907 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 LRRC39Q96DD0 335 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 SEC22AQ96IW7 307 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 RBBP8Q99708 897 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 ACTR6Q9GZN1 396 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 SLITRK2Q9H156 845 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 OPTCQ9UBM4 332 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZNF225Q9UK10 706 aa4.01□□□□□ -1.77
RNU4-39P-201ENST00000362455 A0A0J9YW62 118 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 XKRY2A2RUG3 117 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 SUPT3HB4E1H0 165 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 CLOCKO15516 846 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 SS18L1O75177 396 aaPredicted RBP4□□□□□ -1.77
RNU4-39P-201ENST00000362455 SUPT3HO75486 399 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 SEMA3DO95025 777 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 LGI1O95970 557 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 IGKV1D-16P01601 117 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 RAB10P61026 200 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZNF45Q02386 682 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 DUSP7Q16829 419 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 KLF17Q5JT82 389 aaPredicted RBP4□□□□□ -1.77
RNU4-39P-201ENST00000362455 C11orf71Q6IPW1 123 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZYG11AQ6WRX3 759 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 COMMD6Q7Z4G1 85 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 FAM220AQ7Z4H9 259 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 GALNT10Q86SR1 603 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 MARCH3Q86UD3 253 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 SLC22A9Q8IVM8 553 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 UBE2J2Q8N2K1 259 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 C11orf42Q8N5U0 333 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 TMEM252Q8N6L7 170 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR7G2Q8NG99 324 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR9A2Q8NGT5 310 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 STAG3L4Q8TBR4 150 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 S100PBPQ96BU1 408 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 FOLH1BQ9HBA9 442 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 DKKL1Q9UK85 242 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 ACOT9Q9Y305 439 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 RPL36Q9Y3U8 105 aaKnown RBP4□□□□□ -1.77
RNU4-39P-201ENST00000362455 SMAD5-AS1Q9Y6J3 95 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 ALPK2Q86TB3 2170 aa4□□□□□ -1.77
RNU4-39P-201ENST00000362455 NINQ8N4C6 2090 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 RAI1Q7Z5J4 1906 aaPredicted RBP3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 IGKV1D-8A0A087WSZ0 117 aa3.99□□□□□ -1.77
RNU4-39P-201ENST00000362455 IGLV3-32A0A0A0MS00 114 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms