RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
CXCL12-201ENST00000343575 BEX1Q9HBH7 125 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 TCF7L1Q9HCS4 588 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 FLVCR2Q9UPI3 526 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 FOXJ3Q9UPW0 622 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 C16orf97H3BN30 126 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 UBBP0CG47 229 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 RPA2P15927 270 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 FAHP16930 419 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 GNLYP22749 145 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 RPS27AP62979 156 aaKnown RBP12.64□□□□□ -0.39
CXCL12-201ENST00000343575 UBA52P62987 128 aaKnown RBP12.64□□□□□ -0.39
CXCL12-201ENST00000343575 OR8B8Q15620 311 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 TBC1D28Q2M2D7 210 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 DMRTC1Q5HYR2 192 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 DNM1P46Q6ZS02 220 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 RNF144BQ7Z419 303 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 SERPINA12Q8IW75 414 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 STEAP2Q8NFT2 490 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 NKX3-1Q99801 234 aaPredicted RBP12.64□□□□□ -0.39
CXCL12-201ENST00000343575 SEC22CQ9BRL7 303 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 SLITRK2Q9H156 845 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 RGCCQ9H4X1 137 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 OPN4Q9UHM6 478 aa12.64□□□□□ -0.39
CXCL12-201ENST00000343575 A0A0B4J203 849 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 IGKV1-9A0A0C4DH69 117 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 XRCC2O43543 280 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 SMPD2O60906 423 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 THBDP07204 575 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 CHRNB4P30926 498 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 GSK3AP49840 483 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 PPA1Q15181 289 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 RBMS2Q15434 407 aaKnown RBP12.63□□□□□ -0.39
CXCL12-201ENST00000343575 TMEM69Q5SWH9 247 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 TMEM17Q86X19 198 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 OR5AS1Q8N127 324 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 PRR7Q8TB68 274 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 ARL6Q9H0F7 186 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 OR51B6Q9H340 312 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 CRIM1Q9NZV1 1036 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 HEATR1Q9H583 2144 aaKnown RBP12.63□□□□□ -0.39
CXCL12-201ENST00000343575 F5H5P2 479 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 PTH2RP49190 550 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 ART1P52961 327 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 ERVS71-1P61550 626 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 FBXL19-AS1Q494R0 122 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 CRIP3Q6Q6R5 217 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 CA10Q9NS85 328 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 ZNF391Q9UJN7 358 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 PIGLQ9Y2B2 252 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 KCNK7Q9Y2U2 307 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 V9GY05 133 aa12.63□□□□□ -0.39
CXCL12-201ENST00000343575 IGHV2OR16-5A0A0B4J2B6 119 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 ANXA2P2A6NMY6 339 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 DHRS7CA6NNS2 312 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 C1QL1O75973 258 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 GNALP38405 381 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 ZNF83P51522 516 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 S100A12P80511 92 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 SSBP1Q04837 148 aaKnown RBP12.62□□□□□ -0.39
CXCL12-201ENST00000343575 UBE2V2Q15819 145 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 TMEM255AQ5JRV8 349 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 SHEQ5VZ18 495 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 FAM166AQ6J272 317 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 SEMA6DQ8NFY4 1073 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 OR13C9Q8NGT0 318 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 OR1S1Q8NH92 325 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 SSC4DQ8WTU2 575 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 SLC25A38Q96DW6 304 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 CDH20Q9HBT6 801 aa12.62□□□□□ -0.39
CXCL12-201ENST00000343575 A0A0D9SG52 128 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 ARPC5O15511 151 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 CSF1P09603 554 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 GRNP28799 593 aaKnown RBP12.61□□□□□ -0.39
CXCL12-201ENST00000343575 ASCL1P50553 236 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 UCP2P55851 309 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 NAAAQ02083 359 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 TMEM42Q69YG0 159 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 ALKBH2Q6NS38 261 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 ALKAL2Q6UX46 152 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 SLC36A1Q7Z2H8 476 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 OR1M1Q8NGA1 313 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 OR52N4Q8NGI2 321 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 MUCL1Q96DR8 90 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 CHST5Q9GZS9 411 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 ALX4Q9H161 411 aaPredicted RBP12.61□□□□□ -0.39
CXCL12-201ENST00000343575 FAM90A27PA6NNH2 459 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 TEX46H3BTG2 121 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 MGMTP16455 207 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 ZNF20P17024 532 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 CFPP27918 469 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 THBS4P35443 961 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 CLDN12P56749 244 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 B2MP61769 119 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 C3orf36Q3SXR2 165 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms