RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC25A26Q70HW3 274 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 CALHM1Q8IU99 346 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 MKXQ8IYA7 352 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 Q8IYB0 196 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 ZNF418Q8TF45 676 aaPredicted RBP15.93■□□□□ 0.14
SYNE4-202ENST00000340477 H1FXQ92522 213 aaKnown RBP15.93■□□□□ 0.14
SYNE4-202ENST00000340477 SMIM19Q96E16 107 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 CEP19Q96LK0 163 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 ZNF488Q96MN9 340 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 GAFA1Q96PS6 74 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 NRIP2Q9BQI9 281 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 SLC25A10Q9UBX3 287 aaPredicted RBP15.93■□□□□ 0.14
SYNE4-202ENST00000340477 CLEC2DQ9UHP7 191 aa15.93■□□□□ 0.14
SYNE4-202ENST00000340477 SIGLEC5O15389 551 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 MAGEB3O15480 346 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 HCKP08631 526 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 ACAA1P09110 424 aaPredicted RBP15.92■□□□□ 0.14
SYNE4-202ENST00000340477 PSG2P11465 335 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 NDUFB7P17568 137 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 C6orf141Q5SZD1 244 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 METTL11BQ5VVY1 283 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 TMEM185AQ8NFB2 350 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 ANKRD60Q9BZ19 345 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 ZNF281Q9Y2X9 895 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 TPRKBQ9Y3C4 175 aa15.92■□□□□ 0.14
SYNE4-202ENST00000340477 ZNF879B4DU55 563 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 SULT1B1O43704 296 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 MT-ND2P03891 347 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 MYF6P23409 242 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 WNT4P56705 351 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 FGF12P61328 243 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 LAIR2Q6ISS4 152 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 CMTM4Q8IZR5 234 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 PARP16Q8N5Y8 322 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 EMG1Q92979 244 aaKnown RBP15.91■□□□□ 0.14
SYNE4-202ENST00000340477 SLAMF9Q96A28 289 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 DACT3Q96B18 629 aaPredicted RBP15.91■□□□□ 0.14
SYNE4-202ENST00000340477 MND1Q9BWT6 205 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 SUCNR1Q9BXA5 334 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 OR14J1Q9UGF5 321 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 RPUSD1Q9UJJ7 312 aaKnown RBP15.91■□□□□ 0.14
SYNE4-202ENST00000340477 NUP50Q9UKX7 468 aa15.91■□□□□ 0.14
SYNE4-202ENST00000340477 MXRA5Q9NR99 2828 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 IGKV1D-17A0A075B6S4 117 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 IGKV1-27A0A075B6S5 117 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 IGKV1-9A0A0C4DH69 117 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 A0A1B0GW55 424 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 RFPL4AA6NLU0 287 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 PTGES3LE9PB15 166 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 RFPL4AL1F8VTS6 287 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 KNG1P01042 644 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4L2P0CJ85 424 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4L3P0CJ86 424 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4L4P0CJ87 422 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4L5P0CJ88 424 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4L6P0CJ89 424 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4L7P0CJ90 424 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 RAB3AP20336 220 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 VHLP40337 213 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 SOX2P48431 317 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 CAV3P56539 151 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 PPP3R1P63098 170 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 XAF1Q6GPH4 301 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4L9Q6RFH8 374 aaPredicted RBP15.9■□□□□ 0.14
SYNE4-202ENST00000340477 BATF2Q8N1L9 274 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 ZNF561Q8N587 486 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 RPS4Y2Q8TD47 263 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 UPRTQ96BW1 309 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 SDSLQ96GA7 329 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 JMJD8Q96S16 334 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 PCGF1Q9BSM1 259 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 HES4Q9HCC6 221 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 FKBP14Q9NWM8 211 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 DUX4Q9UBX2 424 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 ZNF222Q9UK12 451 aa15.9■□□□□ 0.14
SYNE4-202ENST00000340477 A0A0A6YYJ9 748 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 A0A1W2PQ09 198 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 OGG1O15527 345 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 TOX4O94842 621 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 INMTO95050 263 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 ALX3O95076 343 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 FSHBP01225 129 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 CDK1P06493 297 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 C21orf33P30042 268 aaPredicted RBP15.89■□□□□ 0.13
SYNE4-202ENST00000340477 PRDX2P32119 198 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 DGUOKQ16854 277 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 YIF1BQ5BJH7 314 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 GPR157Q5UAW9 335 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 RBMS3Q6XE24 437 aaKnown RBP15.89■□□□□ 0.13
SYNE4-202ENST00000340477 TMEM158Q8WZ71 300 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 TMEM106AQ96A25 262 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 DMRTB1Q96MA1 342 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 DCTN5Q9BTE1 182 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 MS4A7Q9GZW8 240 aaPredicted RBP15.89■□□□□ 0.13
SYNE4-202ENST00000340477 CNTD2Q9H8S5 307 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 ONECUT1Q9UBC0 465 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 CKLFQ9UBR5 152 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 GLS2Q9UI32 602 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 PCDHGB5Q9Y5G0 923 aa15.89■□□□□ 0.13
SYNE4-202ENST00000340477 TRBV23-1A0A0A0MS06 115 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms