RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 RIPPLY2Q5TAB7 128 aa15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 ABHD17BQ5VST6 288 aa15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 HSD17B13Q7Z5P4 300 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 MRPS24Q96EL2 167 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 ZPBPQ9BS86 351 aa15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 BARX1Q9HBU1 254 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 SLC7A10Q9NS82 523 aa15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 C14orf166Q9Y224 244 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-201ENST00000291842 ITGA3P26006 1051 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 MAGEA5P43359 124 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 RAB32Q13637 225 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 PLCXD3Q63HM9 321 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 FBXL14Q8N1E6 418 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 CMSS1Q9BQ75 279 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 SLC6A15Q9H2J7 730 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 CALHM2Q9HA72 323 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 TAS2R3Q9NYW6 316 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 ANXA10Q9UJ72 324 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 DNAJC13O75165 2243 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 MED13Q9UHV7 2174 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 KRBOX1C9JBD0 128 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 MMP7P09237 267 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 PCBD1P61457 104 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 ARL6IP1Q15041 203 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 PAN3Q58A45 887 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 LHFPL2Q6ZUX7 228 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 TUSC5Q8IXB3 177 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 OR10AD1Q8NGE0 317 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 PIK3IP1Q96FE7 263 aa15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 ZNF703Q9H7S9 590 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-201ENST00000291842 ZNF850A8MQ14 1090 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 OR5H8P0DN80 308 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 LHX2P50458 406 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 S100A10P60903 97 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 PPIAP62937 165 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 ARF1P84077 181 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 ZNF528Q3MIS6 628 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 PXDC1Q5TGL8 231 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 TMEM200AQ86VY9 491 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 TOMM40LQ969M1 308 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 FAM173AQ9BQD7 235 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 DDA1Q9BW61 102 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 MRPS18CQ9Y3D5 142 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 FAM186AA6NE01 2351 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 FARS2O95363 451 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 ARHGDIBP52566 201 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 OR1C1Q15619 314 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 TMEM42Q69YG0 159 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 CALHM1Q8IU99 346 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 ST3GAL6Q9Y274 331 aa15.9■□□□□ 0.14
SHKBP1-201ENST00000291842 URB1O60287 2271 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 TRBV6-7A0A0A0MS04 114 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 TEX13DA0A0J9YY54 714 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 HLA-HP01893 362 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 SP9P0CG40 484 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 CHATP28329 748 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 PDZK1IP1Q13113 114 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 C3AR1Q16581 482 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 PDSS1Q5T2R2 415 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 RTL6Q6ICC9 239 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 OSR2Q8N2R0 312 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 FNDC9Q8TBE3 224 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 MARS2Q96GW9 593 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 SHARPINQ9H0F6 387 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 SLC7A11Q9UPY5 501 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 CA11O75493 328 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 IFNA2P01563 188 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 FCGR3AP08637 254 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 ZNF883P0CG24 379 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 FXYD4P59646 89 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 PPA1Q15181 289 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 ZBTB44Q8NCP5 570 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 PHYHIPLQ96FC7 376 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 C2orf50Q96LR7 162 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 IL17BQ9UHF5 180 aa15.89■□□□□ 0.13
SHKBP1-201ENST00000291842 TSPAN4O14817 238 aa15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 NUPL2O15504 423 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 APOC3P02656 99 aa15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 GLI4P10075 376 aa15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 CLDN18P56856 261 aa15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 DCAF10Q5QP82 559 aa15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 POC1AQ8NBT0 407 aa15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 CPNE2Q96FN4 548 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 TTTY12Q9BZ98 90 aa15.88■□□□□ 0.13
SHKBP1-201ENST00000291842 LOC105371267A0A1B0GV96 52 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 ZNF503-AS2A6NEH8 195 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 CD59P13987 128 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 RBMXP38159 391 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 NPBWR2P48146 333 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 FUT6P51993 359 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 OR8B8Q15620 311 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 SP6Q3SY56 376 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 PRSS54Q6PEW0 395 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 EIF4E3Q8N5X7 224 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 OR1S2Q8NGQ3 325 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 OR2S2Q9NQN1 319 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 CYTL1Q9NRR1 136 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 ASF1BQ9NVP2 202 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 CRIM1Q9NZV1 1036 aa15.87■□□□□ 0.13
SHKBP1-201ENST00000291842 DOCK7Q96N67 2140 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms