RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PCOLCE2Q9UKZ9 415 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 RNASEK-C17orf49H0YIS7 233 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 EPPINO95925 133 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 EPXP11678 715 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 WFDC3Q8IUB2 231 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 TNFRSF12AQ9NP84 129 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 FGF20Q9NP95 211 aaPredicted RBP11.79□□□□□ -0.52
COL1A1-201ENST00000225964 WBP1LQ9NX94 342 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 ALS2Q96Q42 1657 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 TOX3O15405 576 aaPredicted RBP11.79□□□□□ -0.52
COL1A1-201ENST00000225964 FZD6O60353 706 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 WNT1P04628 370 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 USF1P22415 310 aaPredicted RBP11.79□□□□□ -0.52
COL1A1-201ENST00000225964 SRD5A2P31213 254 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 TSPAN32Q96QS1 320 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 TRAV1-2A0A0B4J238 106 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 KCNJ3P48549 501 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 NEURL1O76050 574 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 FPR2P25090 351 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 RAE1P78406 368 aaKnown RBP11.79□□□□□ -0.52
COL1A1-201ENST00000225964 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 FAM27D1Q5T7N8 215 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 OR2M3Q8NG83 312 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 GPBAR1Q8TDU6 330 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 WDR38Q5JTN6 314 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 ABHD14AQ9BUJ0 271 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 MMP25Q9NPA2 562 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 ADAMTSL3P82987 1691 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 C3orf85A0A1B0GTC6 90 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 A0A1B0GUH1 482 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 SPAARA0A1B0GVQ0 90 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 CLDN20P56880 219 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 ZNF574Q6ZN55 896 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-201ENST00000225964 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-201ENST00000225964 A0A0B4J2E0 115 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 A0A1B0GX12 115 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 CCL21O00585 134 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 PTGFRP43088 359 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-201ENST00000225964 NUFIP2Q7Z417 695 aaKnown RBP11.78□□□□□ -0.52
COL1A1-201ENST00000225964 MRGPRX3Q96LB0 322 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 DOCK1Q14185 1865 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 C9orf172C9J069 976 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 OR6C3Q9NZP0 311 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 MASP2O00187 686 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 CTSVO60911 334 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 EVX1P49640 407 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 GNG4P50150 75 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 PJVKQ0ZLH3 352 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 VAMP3Q15836 100 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 C6orf201Q7Z4U5 140 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 COMMD1Q8N668 190 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 SNRPGP15A8MWD9 76 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 TRAPPC2P0DI81 140 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 TRAPPC2BP0DI82 140 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 OR3A1P47881 315 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 BAK1Q16611 211 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 C19orf35Q6ZS72 473 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 OR2W3Q7Z3T1 314 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 OR4A4PQ8NGN8 299 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 SAP30LQ9HAJ7 183 aa11.78□□□□□ -0.52
COL1A1-201ENST00000225964 DNAJB12Q9NXW2 375 aaKnown RBP11.78□□□□□ -0.52
COL1A1-201ENST00000225964 SLC17A2O00624 439 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 BCL2L11O43521 198 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 AREGP15514 252 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 SSBP1Q04837 148 aaKnown RBP11.77□□□□□ -0.52
COL1A1-201ENST00000225964 FOXO1Q12778 655 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 SLC25A30Q5SVS4 291 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 MOGAT3Q86VF5 341 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 NHSQ6T4R5 1651 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 AKR7A2O43488 359 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 RIMKLAQ8IXN7 391 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 TCFL5Q9UL49 500 aa11.77□□□□□ -0.52
COL1A1-201ENST00000225964 PLPP3O14495 311 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 NPY1RP25929 384 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 PRSS12P56730 875 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 NHLH1Q02575 133 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 NHLH2Q02577 135 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 DGAT2L7PQ6IED9 249 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 GLRX2Q9NS18 164 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 AUP1Q9Y679 476 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 COX6B1P14854 86 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 ACP1P24666 158 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 TMEM18Q96B42 140 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 CYSLTR2Q9NS75 346 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 OR1L1Q8NH94 360 aa11.77□□□□□ -0.53
COL1A1-201ENST00000225964 SEMA7AO75326 666 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 GALR1P47211 349 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 SLC25A1P53007 311 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 LINC00303Q3SY05 128 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 AMER3Q8N944 861 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-201ENST00000225964 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 NIT2Q9NQR4 276 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 HYAL3O43820 417 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-201ENST00000225964 PIK3IP1Q96FE7 263 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 SLC45A2Q9UMX9 530 aa11.76□□□□□ -0.53
COL1A1-201ENST00000225964 IGHV3OR15-7A0A075B7D8 119 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms