RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 IGSF23A1L1A6 192 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 GPANK1O95872 356 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 OPN1MWP04001 364 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 OPN1MW2P0DN77 364 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 OPN1MW3P0DN78 364 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 LGALS3P17931 250 aaKnown RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 OR4S2Q8NH73 311 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PTP4A1Q93096 173 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 TAF9BQ9HBM6 251 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 LYRM2Q9NU23 88 aaPredicted RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 COA3Q9Y2R0 106 aaPredicted RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 C2CD4DB7Z1M9 353 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 DHHO43323 396 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 AQP8O94778 261 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 RAF1P04049 648 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 LIPFP07098 398 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 NME2P22392 152 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 GABRB3P28472 473 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SUMO2P61956 95 aaKnown RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 ETFDHQ16134 617 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SPPL3Q8TCT6 385 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PHYHIPQ92561 330 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 OR5M11Q96RB7 305 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ZMAT4Q9H898 229 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 JTBO76095 146 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PTBP3O95758 552 aaKnown RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 STPG1Q5TH74 334 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 DTX1Q86Y01 620 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 EEF1AKMT3Q96AZ1 226 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SLC39A13Q96H72 371 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 A0A1W2PPC1 479 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 LYRM1O43325 122 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 GJB3O75712 270 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ABCC6O95255 1503 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 MAS1LP35410 378 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 TAGLNQ01995 201 aaKnown RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 CDC20Q12834 499 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 DOT1LQ8TEK3 1739 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 L3HYPDHQ96EM0 354 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PLA2G3Q9NZ20 509 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PPIAL4EA0A075B759 164 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PPIAL4DF5H284 164 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 MITFO75030 526 aaPredicted RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 SNAI1O95863 264 aaPredicted RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 PPIAL4FP0DN26 164 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 REEP5Q00765 189 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 GABRA6Q16445 453 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 LRRTM3Q86VH5 581 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SHISA4Q96DD7 197 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PDLIM7Q9NR12 457 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PPIAL4AQ9Y536 164 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 A0A1W2PNR3 127 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 PITX3O75364 302 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 VDAC2P45880 294 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 PPOXP50336 477 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 SUMO3P55854 103 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 P2RX3P56373 397 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 Q499Y3 187 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 COX19Q49B96 90 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 EPGNQ6UW88 154 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 UNQ5815/PRO19632Q6UWF5 114 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 RAB24Q969Q5 203 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 SLC35B4Q969S0 331 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 TSPAN13O95857 204 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 COMPP49747 757 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 TSPAN31Q12999 210 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 ZNF385CQ66K41 422 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 MRGPRGQ86SM5 289 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 OR4A5Q8NH83 315 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 ITLN2Q8WWU7 325 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 GPR35Q9HC97 309 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 LOXHD1Q8IVV2 1947 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 LRRC56Q8IYG6 542 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 TEAD3Q99594 435 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 K7ERQ8 282 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 ZNF354AO60765 605 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 C6orf201Q7Z4U5 140 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 NEU1Q99519 415 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 SLC25A21Q9BQT8 299 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 SLC46A2Q9BY10 475 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 METTL17Q9H7H0 456 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 HSPB8Q9UJY1 196 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 A0A1W2PQL4 384 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 A1L4Q6 167 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 UPK1AO00322 258 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 MYPOPQ86VE0 399 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 CLECL1Q8IZS7 167 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 OR4B1Q8NGF8 309 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 OR2T35Q8NGX2 323 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 GPX8Q8TED1 209 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 KHSRPQ92945 711 aaKnown RBP eCLIP3.09□□□□□ -1.92
NEB-201ENST00000172853 IGHV3-20A0A0C4DH32 117 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 CFDP00746 253 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 CD14P08571 375 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 ARRB2P32121 409 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 MMDQ15546 238 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 TWIST1Q15672 202 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 NFAM1Q8NET5 270 aaPredicted RBP3.09□□□□□ -1.92
NEB-201ENST00000172853 TMEM106AQ96A25 262 aa3.09□□□□□ -1.92
NEB-201ENST00000172853 PTX4Q96A99 478 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms