RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 LIPKQ5VXJ0 399 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TMEM225Q6GV28 225 aa4□□□□□ -1.77
VPS29-212ENST00000621131 OR5M10Q6IEU7 315 aa4□□□□□ -1.77
VPS29-212ENST00000621131 H3F3CQ6NXT2 135 aa4□□□□□ -1.77
VPS29-212ENST00000621131 C16orf87Q6PH81 154 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF322Q6U7Q0 402 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 C16orf47Q6ZP98 133 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 SLC35D2Q76EJ3 337 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TIPARPQ7Z3E1 657 aaKnown RBP4□□□□□ -1.77
VPS29-212ENST00000621131 LHFPL3Q86UP9 236 aa4□□□□□ -1.77
VPS29-212ENST00000621131 MARCH9Q86YJ5 346 aa4□□□□□ -1.77
VPS29-212ENST00000621131 GTPBP8Q8N3Z3 284 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 MS4A15Q8N5U1 240 aa4□□□□□ -1.77
VPS29-212ENST00000621131 LRRC17Q8N6Y2 441 aa4□□□□□ -1.77
VPS29-212ENST00000621131 FADS6Q8N9I5 356 aa4□□□□□ -1.77
VPS29-212ENST00000621131 CYB561A3Q8NBI2 242 aa4□□□□□ -1.77
VPS29-212ENST00000621131 NUP37Q8NFH4 326 aa4□□□□□ -1.77
VPS29-212ENST00000621131 OR4F15Q8NGB8 312 aa4□□□□□ -1.77
VPS29-212ENST00000621131 OR13C3Q8NGS6 347 aa4□□□□□ -1.77
VPS29-212ENST00000621131 MCFD2Q8NI22 146 aa4□□□□□ -1.77
VPS29-212ENST00000621131 GATAD1Q8WUU5 269 aa4□□□□□ -1.77
VPS29-212ENST00000621131 SPRYD4Q8WW59 207 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 ZMYND19Q96E35 227 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 Q96M85 177 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TSPAN32Q96QS1 320 aa4□□□□□ -1.77
VPS29-212ENST00000621131 RBP7Q96R05 134 aa4□□□□□ -1.77
VPS29-212ENST00000621131 OR5B2Q96R09 309 aa4□□□□□ -1.77
VPS29-212ENST00000621131 OR5M11Q96RB7 305 aa4□□□□□ -1.77
VPS29-212ENST00000621131 INTS14Q96SY0 518 aa4□□□□□ -1.77
VPS29-212ENST00000621131 NMNAT3Q96T66 252 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TBX5Q99593 518 aa4□□□□□ -1.77
VPS29-212ENST00000621131 FAM173AQ9BQD7 235 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TTYH2Q9BSA4 534 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ALG12Q9BV10 488 aa4□□□□□ -1.77
VPS29-212ENST00000621131 COMMD4Q9H0A8 199 aa4□□□□□ -1.77
VPS29-212ENST00000621131 RERGLQ9H628 205 aa4□□□□□ -1.77
VPS29-212ENST00000621131 AKIRIN1Q9H9L7 192 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 ADGRL4Q9HBW9 690 aa4□□□□□ -1.77
VPS29-212ENST00000621131 Q9N2K0 584 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TIGARQ9NQ88 270 aa4□□□□□ -1.77
VPS29-212ENST00000621131 BABAM2Q9NXR7 383 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TAS2R16Q9NYV7 291 aa4□□□□□ -1.77
VPS29-212ENST00000621131 STMN3Q9NZ72 180 aa4□□□□□ -1.77
VPS29-212ENST00000621131 LAMP5Q9UJQ1 280 aa4□□□□□ -1.77
VPS29-212ENST00000621131 GNG8Q9UK08 70 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF346Q9UL40 294 aaKnown RBP4□□□□□ -1.77
VPS29-212ENST00000621131 TP53TG3Q9ULZ0 132 aa4□□□□□ -1.77
VPS29-212ENST00000621131 RASD1Q9Y272 281 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TRAPPC4Q9Y296 219 aa4□□□□□ -1.77
VPS29-212ENST00000621131 LSM2Q9Y333 95 aaKnown RBP4□□□□□ -1.77
VPS29-212ENST00000621131 PEX16Q9Y5Y5 336 aa4□□□□□ -1.77
VPS29-212ENST00000621131 FKBP7Q9Y680 259 aa4□□□□□ -1.77
VPS29-212ENST00000621131 NBASA2RRP1 2371 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 NINQ8N4C6 2090 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TRDV1A0A1B0GX56 115 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PRSS37A4D1T9 235 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TRIM64BA6NI03 449 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 ZNF879B4DU55 563 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 CLDN25C9JDP6 229 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 LRRN3E7EW58 273 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 KLRC4-KLRK1H3BQV0 150 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PDCD5O14737 125 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 CASKO14936 926 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 GPRIN2O60269 458 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 DOK2O60496 412 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 SLC16A7O60669 478 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 NPIPB7O75200 414 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TRAPPC6AO75865 159 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 ARL6IP5O75915 188 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 VAMP5O95183 116 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 IGHV3-13P01766 116 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 IGHG1P01857 330 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PRB1P04280 392 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 GYPBP06028 91 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 LIMS3P0CW19 117 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 LIMS4P0CW20 117 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 CCL3P10147 92 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 CELP19835 753 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 EDNRAP25101 427 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 MAPK3P27361 379 aaPredicted RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 SFTPDP35247 375 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 MNDAP41218 407 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PTGDSP41222 190 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 NAA10P41227 235 aaPredicted RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 RANBP1P43487 201 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 RORCP51449 518 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 NCS1P62166 190 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 INAQ16352 499 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 ACKR1Q16570 336 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TMEM176BQ3YBM2 270 aaPredicted RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 MESTQ5EB52 335 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 SPANXN2Q5MJ10 180 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 OR2G6Q5TZ20 316 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 AGAP7PQ5VUJ5 663 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TIGD3Q6B0B8 471 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 RPL22L1Q6P5R6 122 aaKnown RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 ARSKQ6UWY0 536 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 Q6ZR54 194 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 CHMP1BQ7LBR1 199 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms