RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 GFOD2Q3B7J2 385 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 AWAT1Q58HT5 328 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 UBE2UQ5VVX9 321 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 WDR25Q64LD2 544 aaPredicted RBP11.11□□□□□ -0.63
CTSA-213ENST00000606782 BTNL3Q6UXE8 466 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
CTSA-213ENST00000606782 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
CTSA-213ENST00000606782 SVOPQ8N4V2 548 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 OR5AK2Q8NH90 309 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 ZNF48Q96MX3 618 aaPredicted RBP11.11□□□□□ -0.63
CTSA-213ENST00000606782 PDCD1LG2Q9BQ51 273 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 PRDM13Q9H4Q3 707 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 RNF7Q9UBF6 113 aa11.11□□□□□ -0.63
CTSA-213ENST00000606782 A0A087WXM4 84 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 LGALS8O00214 317 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 SYT7O43581 403 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 DHRS3O75911 302 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 NPY4RP50391 375 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 RIPPLY1Q0D2K3 151 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 MLLT11Q13015 90 aaPredicted RBP11.1□□□□□ -0.63
CTSA-213ENST00000606782 TPBGQ13641 420 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 C11orf91Q3C1V1 193 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 PRAMEF6Q5VXH4 476 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 LYPD2Q6UXB3 125 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 ZNF367Q7RTV3 350 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 ZNF676Q8N7Q3 588 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 CSNK2A3Q8NEV1 391 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 OR56B2PQ8NGI1 322 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 GHSRQ92847 366 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 SMIM19Q96E16 107 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 PGLYRP3Q96LB9 341 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 MGLLQ99685 303 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 FN3KRPQ9HA64 309 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 UFSP2Q9NUQ7 469 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 CLN8Q9UBY8 286 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 HHLA2Q9UM44 414 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 ZNF281Q9Y2X9 895 aa11.1□□□□□ -0.63
CTSA-213ENST00000606782 A0A1B0GVI7 797 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 DNAJC9-AS1A6NH13 148 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 NDUFA2O43678 99 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 CST4P01036 141 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 LHBP01229 141 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 RNASE1P07998 156 aaKnown RBP11.09□□□□□ -0.63
CTSA-213ENST00000606782 IGHV4-38-2P0DP08 117 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 CPEP16870 476 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 EGR1P18146 543 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 CELP19835 753 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 BPIFB3P59826 476 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 MZT1Q08AG7 82 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 FOXL1Q12952 345 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 KCNJ8Q15842 424 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 ZBTB37Q5TC79 503 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 ZFP41Q8N8Y5 198 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 FCGR1BQ92637 280 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 FAM71F1Q96KD3 344 aaPredicted RBP11.09□□□□□ -0.63
CTSA-213ENST00000606782 OPALINQ96PE5 141 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 NUDT16L1Q9BRJ7 211 aaKnown RBP11.09□□□□□ -0.63
CTSA-213ENST00000606782 ADAT1Q9BUB4 502 aaKnown RBP11.09□□□□□ -0.63
CTSA-213ENST00000606782 MS4A7Q9GZW8 240 aaPredicted RBP11.09□□□□□ -0.63
CTSA-213ENST00000606782 COMMD4Q9H0A8 199 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 PIGLQ9Y2B2 252 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 RHBDD3Q9Y3P4 386 aa11.09□□□□□ -0.63
CTSA-213ENST00000606782 LOC107986453A0A1B0GWG9 222 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 C22orf46C9J442 243 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 ENSAO43768 121 aaKnown RBP11.08□□□□□ -0.64
CTSA-213ENST00000606782 LIPFP07098 398 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 RPS11P62280 158 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTSA-213ENST00000606782 SYT6Q5T7P8 510 aaPredicted RBP11.08□□□□□ -0.64
CTSA-213ENST00000606782 TMEM42Q69YG0 159 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 KCTD8Q6ZWB6 473 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 COMMD2Q86X83 199 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 OR51A4Q8NGJ6 313 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 OR10AC1Q8NH08 325 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 GPR148Q8TDV2 347 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 RGP1Q92546 391 aaPredicted RBP11.08□□□□□ -0.64
CTSA-213ENST00000606782 C10orf35Q96D05 121 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 CTSZQ9UBR2 303 aa11.08□□□□□ -0.64
CTSA-213ENST00000606782 TRAV38-1A0A0B4J264 116 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.07□□□□□ -0.64
CTSA-213ENST00000606782 TRBV5-5A0A0J9YX44 114 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 ZNF816-ZNF321PA0A0X1KG74 233 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 ANKRD30BLA7E2S9 258 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 INMTO95050 263 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 HSMCR30P0CW71 290 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 JUNBP17275 347 aaPredicted RBP11.07□□□□□ -0.64
CTSA-213ENST00000606782 CFHR2P36980 270 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 BAMBIQ13145 260 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 SLC9A3R2Q15599 337 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 YIF1BQ5BJH7 314 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 LIPKQ5VXJ0 399 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 TEX36Q5VZQ5 186 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 CD276Q5ZPR3 534 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 UNQ9370/PRO34162Q6UXP9 181 aa11.07□□□□□ -0.64
CTSA-213ENST00000606782 C11orf53Q8IXP5 236 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms