RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 GATBO75879 557 aaKnown RBP13.87□□□□□ -0.19
SSBP4-213ENST00000602088 PGA5P0DJD9 388 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 MPZP25189 248 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 FUT6P51993 359 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 GBX2P52951 348 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-213ENST00000602088 KLF17Q5JT82 389 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-213ENST00000602088 LAIR2Q6ISS4 152 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 ZNF788Q6ZQV5 615 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 BTN2A1Q7KYR7 527 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 CALHM1Q8IU99 346 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 FAM216BQ8N7L0 139 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 ZNF676Q8N7Q3 588 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 OR51A4Q8NGJ6 313 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 HAVCR2Q8TDQ0 301 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 NPRL2Q8WTW4 380 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 FBLIM1Q8WUP2 373 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 TMIGD2Q96BF3 282 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
SSBP4-213ENST00000602088 DIMT1Q9UNQ2 313 aaKnown RBP13.87□□□□□ -0.19
SSBP4-213ENST00000602088 CAB39Q9Y376 341 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-213ENST00000602088 IGKV1D-17A0A075B6S4 117 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 IGKV1-27A0A075B6S5 117 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 H0YJX3 145 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 TCF21O43680 179 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 ZFPL1O95159 310 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 ECDO95905 644 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-213ENST00000602088 LIPFP07098 398 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 RPSAP08865 295 aaKnown RBP13.86□□□□□ -0.19
SSBP4-213ENST00000602088 ACAA1P09110 424 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-213ENST00000602088 PSG2P11465 335 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 ACP7Q6ZNF0 438 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 UTS2BQ765I0 119 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 ANGPTL5Q86XS5 388 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 FGFRL1Q8N441 504 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 TRMT10AQ8TBZ6 339 aaKnown RBP13.86□□□□□ -0.19
SSBP4-213ENST00000602088 GGHQ92820 318 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 UPRTQ96BW1 309 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 MED30Q96HR3 178 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 ZNF488Q96MN9 340 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 GAFA1Q96PS6 74 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 PKIBQ9C010 78 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 PLCXD1Q9NUJ7 323 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 POLDIP2Q9Y2S7 368 aa13.86□□□□□ -0.19
SSBP4-213ENST00000602088 IGKV1-9A0A0C4DH69 117 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 TMEM212A6NML5 194 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 GPR37O15354 613 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 NDUFB3O43676 98 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 TFF1P04155 84 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 CCDC159P0C7I6 412 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 ZNF20P17024 532 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 GTF2A1P52655 376 aaPredicted RBP13.85□□□□□ -0.19
SSBP4-213ENST00000602088 ERVK11-1P61568 191 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 IL13RA1P78552 427 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 IL24Q13007 206 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 IKZF1Q13422 519 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 CNN3Q15417 329 aaKnown RBP13.85□□□□□ -0.19
SSBP4-213ENST00000602088 TMPRSS11AQ6ZMR5 421 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 PNLDC1Q8NA58 520 aaKnown RBP13.85□□□□□ -0.19
SSBP4-213ENST00000602088 DNAAF1Q8NEP3 725 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 OR13C3Q8NGS6 347 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 OR5AK2Q8NH90 309 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 ST8SIA4Q92187 359 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 BORCS8Q96FH0 119 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 TMEM80Q96HE8 168 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 PDCD1LG2Q9BQ51 273 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 NRIP2Q9BQI9 281 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 CLEC2DQ9UHP7 191 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 RPUSD1Q9UJJ7 312 aaKnown RBP13.85□□□□□ -0.19
SSBP4-213ENST00000602088 ZNF222Q9UK12 451 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 NUP50Q9UKX7 468 aa13.85□□□□□ -0.19
SSBP4-213ENST00000602088 EXOSC1Q9Y3B2 195 aaKnown RBP13.85□□□□□ -0.19
SSBP4-213ENST00000602088 A0A0A6YYJ9 748 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 TRBV2A0A0J9YWF9 115 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 NKX6-3A6NJ46 265 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 ZNF879B4DU55 563 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 SIGLEC5O15389 551 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 XPNPEP2O43895 674 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 PIPP12273 146 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-213ENST00000602088 SELLP14151 372 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 MYL12AP19105 171 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 FGF12P61328 243 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
SSBP4-213ENST00000602088 ST3GAL4Q11206 333 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 DGUOKQ16854 277 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 SMIM21Q3B7S5 101 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 CCDC58Q4VC31 144 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 LRRC10Q5BKY1 277 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 OR2G6Q5TZ20 316 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 XAF1Q6GPH4 301 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-213ENST00000602088 TMEM158Q8WZ71 300 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 COMMD4Q9H0A8 199 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 HES4Q9HCC6 221 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 BABAM2Q9NXR7 383 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 PSORS1C1Q9UIG5 152 aa13.84□□□□□ -0.19
SSBP4-213ENST00000602088 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 RNF212BA8MTL3 300 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 NXPH2O95156 264 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 ATF1P18846 271 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms