RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PAPOLGQ9BWT3 736 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CACNG6Q9BXT2 260 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 MRPL13Q9BYD1 178 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 REG4Q9BYZ8 158 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 C5orf66Q9H5L9 145 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CRLF2Q9HC73 371 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 MYOZ1Q9NP98 299 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 MEPEQ9NQ76 525 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 NANSQ9NR45 359 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CA10Q9NS85 328 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 B3GNT2Q9NY97 397 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 TAS2R5Q9NYW4 299 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 STX18Q9P2W9 335 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 SEC14L4Q9UDX3 406 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF229Q9UJW7 825 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 FBXL3Q9UKT7 428 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 MOKQ9UQ07 419 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 DYSFO75923 2080 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGLV4-3A0A075B6K6 122 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A0B4J203 849 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHV2OR16-5A0A0B4J2B6 119 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 LOC100653049A0A140TA62 436 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM129A0AVI4 362 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 GMNCA6NCL1 334 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CPSF4LA6NMK7 179 aaKnown RBP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF726A6NNF4 738 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 LRRN3E7EW58 273 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ATP6V1G2-DDX39BF2Z307 99 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 M0R3G1 203 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CD5LO43866 347 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 SELENOFO60613 162 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 MTRF1O75570 445 aaKnown RBP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 KRT34O76011 436 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 UBL3O95164 117 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR6A2O95222 327 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 SNAP29O95721 258 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 SERPINA5P05154 406 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 PGA4P0DJD7 388 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 PGA3P0DJD8 388 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ADORA3P0DMS8 318 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR8G3PP0DMU2 310 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 NR2C1P13056 603 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 COX4I1P13073 169 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF35P13682 527 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF14P17017 642 aaPredicted RBP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 FUT1P19526 365 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 AHCYP23526 432 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 GIFP27352 417 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 PRDX6P30041 224 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CALCRP30988 508 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 IFNA8P32881 189 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 GLRXP35754 106 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 PPOXP50336 477 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 UGT2B15P54855 530 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 SNRPD2P62316 118 aaKnown RBP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 VLDLRP98155 873 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ST3GAL3Q11203 375 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF146Q15072 292 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 GSG1Q2KHT4 349 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 LRRC37A5PQ49AS3 106 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CYBRD1Q53TN4 286 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 PHYHD1Q5SRE7 291 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 C10orf128Q5T292 105 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF770Q6IQ21 691 aaPredicted RBP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CLEC2AQ6UVW9 174 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC35D2Q76EJ3 337 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 HDDC2Q7Z4H3 204 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CARM1Q86X55 608 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 MEX3DQ86XN8 651 aaKnown RBP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 RBM45Q8IUH3 476 aaKnown RBP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 WDFY1Q8IWB7 410 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 C1orf174Q8IYL3 243 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 MICU2Q8IYU8 434 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 OFCC1Q8IZS5 231 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF540Q8NDQ6 660 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR9Q2Q8NGE9 314 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR6N1Q8NGY5 312 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 C10orf105Q8TEF2 133 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM239Q8WW34 195 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 LZICQ8WZA0 190 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 HIST1H2ACQ93077 130 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CMTM5Q96DZ9 223 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 PRRC1Q96M27 445 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 FOXN4Q96NZ1 517 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 TNFRSF13CQ96RJ3 184 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 DOK1Q99704 481 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 KCNS3Q9BQ31 491 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 CHCHD5Q9BSY4 110 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 EMC6Q9BV81 110 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 C1QTNF6Q9BXI9 259 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ULBP2Q9BZM5 246 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 C1orf198Q9H425 327 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ANKRD19PQ9H560 264 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 EFCAB1Q9HAE3 211 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 GNB4Q9HAV0 340 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM38BQ9NVV0 291 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 MED29Q9NX70 200 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 GLTPQ9NZD2 209 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 ABCD2Q9UBJ2 740 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms