RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 OR10K1Q8NGX5 313 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 GCDHQ92947 438 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 TM2D1Q9BX74 207 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 PURGQ9UJV8 347 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 ANGPTL7O43827 346 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 RBBP9O75884 186 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 ECDO95905 644 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 PLATP00750 562 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 GNG3P63215 75 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 ZNF260Q3ZCT1 412 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 CHST4Q8NCG5 386 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 OR51T1Q8NGJ9 327 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 OR51F2Q8NH61 342 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 SCPEP1Q9HB40 452 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 A0A0A6YYD4 124 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 MEIOCA2RUB1 952 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 HTR3BO95264 441 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 GTF2F2P13984 249 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 AP3S2P59780 193 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 DYRK1AQ13627 763 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 FBXL19-AS1Q494R0 122 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 CDNFQ49AH0 187 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 RGS7BPQ6MZT1 257 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 CALHM1Q8IU99 346 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 ZNF611Q8N823 705 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 OR8G5Q8NG78 346 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 OR8S1Q8NH09 359 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 AQP3Q92482 292 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 MRPS24Q96EL2 167 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 MICU1Q9BPX6 476 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 NICN1Q9BSH3 213 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 SELENOIQ9C0D9 397 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 RBFOX1Q9NWB1 397 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 KLK11Q9UBX7 282 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 TLN1Q9Y490 2541 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 SHANK1Q9Y566 2161 aa15.1■□□□□ 0.01
SHKBP1-224ENST00000600718 IGKV1-12A0A0C4DH73 117 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 H7C417 338 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 IGKV1D-12P01611 117 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 MELTFP08582 738 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 CD40P25942 277 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 GLRXP35754 106 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 HAAOP46952 286 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 SRP9P49458 86 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 FABP6P51161 128 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 SSBP1Q04837 148 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 KLF9Q13886 244 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 ALKBH6Q3KRA9 238 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 TMEM108Q6UXF1 575 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 SLC25A26Q70HW3 274 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 TMEM200AQ86VY9 491 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 ZNF573Q86YE8 665 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 MKXQ8IYA7 352 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 GPX8Q8TED1 209 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 NEDD4LQ96PU5 975 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 C7orf50Q9BRJ6 194 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 RTL8AQ9BWD3 113 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 TMEM100Q9NV29 134 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 MTFP1Q9UDX5 166 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 CACNG2Q9Y698 323 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 WIPF3A6NGB9 483 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 CYB5AP00167 134 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 CPT2P23786 658 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 PTAFRP25105 342 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 SNTB2Q13425 540 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 FAM209AQ5JX71 171 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 NOXA1Q86UR1 476 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 FJX1Q86VR8 437 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 DVL3Q92997 716 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 RAB3CQ96E17 227 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 SEH1LQ96EE3 360 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 ZC3HAV1LQ96H79 300 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 MED30Q96HR3 178 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 TAS2R8Q9NYW2 309 aa15.09■□□□□ 0.01
SHKBP1-224ENST00000600718 CHD8Q9HCK8 2581 aa15.08■□□□□ 0.01
SHKBP1-224ENST00000600718 A0A1B0GUH1 482 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 SOCS1O15524 211 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 TIMM8AO60220 97 aaPredicted RBP15.08■□□□□ 0
SHKBP1-224ENST00000600718 LPLP06858 475 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 THBDP07204 575 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 GSTP1P09211 210 aaKnown RBP15.08■□□□□ 0
SHKBP1-224ENST00000600718 NKX6-1P78426 367 aaPredicted RBP15.08■□□□□ 0
SHKBP1-224ENST00000600718 ADORA2A-AS1P86434 159 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 TMEM255AQ5JRV8 349 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 Q6ZTK2 550 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 WFDC8Q8IUA0 241 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 Q8NFD4 153 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 ANGPTL6Q8NI99 470 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 POM121Q96HA1 1249 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 Q96M66 194 aa15.08■□□□□ 0
SHKBP1-224ENST00000600718 ZMAT3Q9HA38 289 aaKnown RBP15.08■□□□□ 0
SHKBP1-224ENST00000600718 ANKRD20A5PA0PJZ0 165 aa15.07■□□□□ 0
SHKBP1-224ENST00000600718 AKR7A2O43488 359 aa15.07■□□□□ 0
SHKBP1-224ENST00000600718 ZNF250P15622 560 aa15.07■□□□□ 0
SHKBP1-224ENST00000600718 TMEM50BP56557 158 aa15.07■□□□□ 0
SHKBP1-224ENST00000600718 RPS23P62266 143 aaKnown RBP15.07■□□□□ 0
SHKBP1-224ENST00000600718 GUCA2AQ02747 115 aa15.07■□□□□ 0
SHKBP1-224ENST00000600718 OR8G1Q15617 311 aa15.07■□□□□ 0
SHKBP1-224ENST00000600718 OSR2Q8N2R0 312 aa15.07■□□□□ 0
SHKBP1-224ENST00000600718 ENKURQ8TC29 256 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms