RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 DYNC1I2Q13409 638 aaKnown RBP6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 ARSJQ5FYB0 599 aaPredicted RBP6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 TCTEX1D4Q5JR98 221 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 SAMD4BQ5PRF9 694 aaKnown RBP6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 PLCXD3Q63HM9 321 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 RPL13AP3Q6NVV1 102 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 BAIAP2L2Q6UXY1 529 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 ACP7Q6ZNF0 438 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 PLEKHG7Q6ZR37 379 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 COMMD2Q86X83 199 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 OTOSQ8NHW6 89 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 OR51E1Q8TCB6 317 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 CMTM5Q96DZ9 223 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 SDSLQ96GA7 329 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 HIST1H2AAQ96QV6 131 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 MUC13Q9H3R2 512 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 CCDC134Q9H6E4 229 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 HEXA-AS1Q9H8Q6 139 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 CMC2Q9NRP2 79 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 GPR173Q9NS66 373 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 ARL8BQ9NVJ2 186 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 NKX1-2Q9UD57 310 aaPredicted RBP6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 HILPDAQ9Y5L2 63 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 DSCAML1Q8TD84 2053 aa6.95□□□□□ -1.3
SHKBP1-220ENST00000599716 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 FAM90A8PA6NJQ4 464 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 F8VVB4 439 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 F8VWA3 439 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 H3BN98 237 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 PEX14O75381 377 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 VDAC2P45880 294 aaPredicted RBP6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 DLX6P56179 175 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 PSMA6P60900 246 aaKnown RBP6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 GNG3P63215 75 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 EMX1Q04741 257 aaPredicted RBP6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 MFGE8Q08431 387 aaPredicted RBP6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 MICAQ29983 383 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 CEACAM21Q3KPI0 293 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 TMEM236Q5W0B7 351 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 C11orf88Q6PI97 169 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 SHFQ7M4L6 423 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 TCF23Q7RTU1 214 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 TRPM8Q7Z2W7 1104 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 TMEM179BQ7Z7N9 219 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 ANGPTL5Q86XS5 388 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 DEFB107AQ8IZN7 70 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 HS3ST5Q8IZT8 346 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 Q8N2B8 174 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 FTMTQ8N4E7 242 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 TPRX1Q8N7U7 411 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 POC1AQ8NBT0 407 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 OR4F17Q8NGA8 305 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 OR5AU1Q8NGC0 362 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 OR5K1Q8NHB7 308 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 BCAS4Q8TDM0 211 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 OR4F4Q96R69 305 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 OR8B4Q96RC9 309 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 TEAD3Q99594 435 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 WNT10AQ9GZT5 417 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 C1orf21Q9H246 121 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 RGCCQ9H4X1 137 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 NIPAL2Q9H841 368 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 RAB18Q9NP72 206 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 GPR84Q9NQS5 396 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 ARGLU1Q9NWB6 273 aaPredicted RBP6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 FAM206AQ9NX38 181 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 COPS3Q9UNS2 423 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 PIGLQ9Y2B2 252 aa6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 SAMHD1Q9Y3Z3 626 aaKnown RBP6.94□□□□□ -1.3
SHKBP1-220ENST00000599716 TCRBV5S2A0A599 114 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 FAM172BPA6NC97 362 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 ODF3BA8MYP8 253 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 M0R129 80 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 KRT36O76013 467 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 NXPH2O95156 264 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 APOC1P02654 83 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 TK1P04183 234 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 CCDC159P0C7I6 412 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 PGA5P0DJD9 388 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 CALCBP10092 127 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 PF4V1P10720 104 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 MAP2K3P46734 347 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 HAAOP46952 286 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 EDDM3BP56851 147 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 RPS7P62081 194 aaKnown RBP6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 SLC34A1Q06495 639 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 EDDM3AQ14507 147 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 GINS1Q14691 196 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 AANATQ16613 207 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 KHDC1LQ5JSQ8 128 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 ASRGL1Q7L266 308 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 KRT77Q7Z794 578 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 CALHM1Q8IU99 346 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 CPOQ8IVL8 374 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 PGAM4Q8N0Y7 254 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 ASCC1Q8N9N2 400 aaKnown RBP6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 OR10G2Q8NGC3 310 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 TRMT10AQ8TBZ6 339 aaKnown RBP6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 TEX47Q8TBZ9 253 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms