RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TMEM42Q69YG0 159 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 C12orf73Q69YU5 71 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 KDM4DQ6B0I6 523 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 SLC35F2Q8IXU6 374 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 ELMOD2Q8IZ81 293 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 Q8N7P7 452 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 DTX3Q8N9I9 347 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 POC1AQ8NBT0 407 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 CCDC54Q8NEL0 328 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 OR5T2Q8NGG2 359 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 TMEM163Q8TC26 289 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 PPP1R14AQ96A00 147 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 SEH1LQ96EE3 360 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 DUS3LQ96G46 650 aaKnown RBP6.24□□□□□ -1.41
NPC1-208ENST00000590301 FGF23Q9GZV9 251 aaPredicted RBP6.24□□□□□ -1.41
NPC1-208ENST00000590301 GABARAPL1Q9H0R8 117 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 ZNRD1Q9P1U0 126 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 WARS2Q9UGM6 360 aaKnown RBP6.24□□□□□ -1.41
NPC1-208ENST00000590301 ZNF222Q9UK12 451 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 VPREB3Q9UKI3 123 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 PIGLQ9Y2B2 252 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 SF3B6Q9Y3B4 125 aaKnown RBP6.24□□□□□ -1.41
NPC1-208ENST00000590301 R4GMQ9 66 aa6.24□□□□□ -1.41
NPC1-208ENST00000590301 DYSFO75923 2080 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 IGKV1D-17A0A075B6S4 117 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 A0A1B0GW55 424 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 RNASEK-C17orf49H0YIS7 233 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 TIMM23O14925 209 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 SRSF10O75494 262 aaKnown RBP6.23□□□□□ -1.41
NPC1-208ENST00000590301 RHBDL1O75783 438 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 CLPXO76031 633 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 TTRP02766 147 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 KRT8P05787 483 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4L2P0CJ85 424 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4L3P0CJ86 424 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4L4P0CJ87 422 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4L5P0CJ88 424 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4L6P0CJ89 424 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4L7P0CJ90 424 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 PGA5P0DJD9 388 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 PSG2P11465 335 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 FAHP16930 419 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 MPZP25189 248 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 HTR1FP30939 366 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 SAA4P35542 130 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 TGFBR2P37173 567 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 GABRA2P47869 451 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 HCCSP53701 268 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 GMFBP60983 142 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 CXCR4P61073 352 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 AANATQ16613 207 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 CEP78Q5JTW2 689 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 C11orf88Q6PI97 169 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 HAGHLQ6PII5 290 aaPredicted RBP6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4L9Q6RFH8 374 aaPredicted RBP6.23□□□□□ -1.41
NPC1-208ENST00000590301 Q6ZSR3 168 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 MOB3CQ70IA8 216 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 ZNF561Q8N587 486 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 TCEANCQ8N8B7 351 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 ZSCAN4Q8NAM6 433 aaPredicted RBP6.23□□□□□ -1.41
NPC1-208ENST00000590301 TMEM185AQ8NFB2 350 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 TNFRSF14Q92956 283 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 RFKQ969G6 155 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 CITED1Q99966 193 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 NRIP2Q9BQI9 281 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 FAM234AQ9H0X4 552 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 C16orf95Q9H693 158 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 HEXA-AS1Q9H8Q6 139 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 ADGRL4Q9HBW9 690 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 SIRT7Q9NRC8 400 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 TNFRSF19Q9NS68 423 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 SNTG1Q9NSN8 517 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 DUX4Q9UBX2 424 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 OR52A1Q9UKL2 312 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 COPS3Q9UNS2 423 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 RNF114Q9Y508 228 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 AP4S1Q9Y587 144 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 SNX5Q9Y5X3 404 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 V9GYS6 101 aa6.23□□□□□ -1.41
NPC1-208ENST00000590301 A0A1B0GTI1 187 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 PQLC2LA1A4F0 135 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 MEIOCA2RUB1 952 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 PRR32B1ATL7 298 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 H0YAE9 185 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 PSMD9O00233 223 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 SULT1C4O75897 302 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 TSPAN9O75954 239 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 NXPH2O95156 264 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 OR2T7P0C7T2 308 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 SELLP14151 372 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 CCL1P22362 96 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 PRDX2P32119 198 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 HAAOP46952 286 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 CAPZA1P52907 286 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 RPL31P62899 125 aaKnown RBP6.22□□□□□ -1.41
NPC1-208ENST00000590301 SUMO1P63165 101 aaKnown RBP6.22□□□□□ -1.41
NPC1-208ENST00000590301 ELF3P78545 371 aaPredicted RBP6.22□□□□□ -1.41
NPC1-208ENST00000590301 MFGE8Q08431 387 aaPredicted RBP6.22□□□□□ -1.41
NPC1-208ENST00000590301 IL24Q13007 206 aa6.22□□□□□ -1.41
NPC1-208ENST00000590301 TAF9Q16594 264 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms