RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SERPINE3A8MV23 424 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 F5H5P2 479 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 EFSO43281 561 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 SLC22A5O76082 557 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 HLA-AP01891 365 aaKnown RBP16.49■□□□□ 0.23
SMPD3-203ENST00000563226 TPOP07202 933 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 ZBTB25P24278 435 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 WNT5AP41221 380 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 CBX5P45973 191 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 LY6G6FQ5SQ64 297 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 BATF2Q8N1L9 274 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 GMPPAQ96IJ6 420 aaPredicted RBP16.49■□□□□ 0.23
SMPD3-203ENST00000563226 TRIB1Q96RU8 372 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 PAPOLGQ9BWT3 736 aaKnown RBP16.49■□□□□ 0.23
SMPD3-203ENST00000563226 GP6Q9HCN6 339 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 PLEKHJ1Q9NW61 149 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 SERPINA5P05154 406 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 C11orf88Q6PI97 169 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 MRPL21Q7Z2W9 205 aaKnown RBP16.49■□□□□ 0.23
SMPD3-203ENST00000563226 MDP1Q86V88 176 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 OR5M9Q8NGP3 310 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 OR5H2Q8NGV7 314 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 EMG1Q92979 244 aaKnown RBP16.49■□□□□ 0.23
SMPD3-203ENST00000563226 SDCBPO00560 298 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-203ENST00000563226 GEMIN2O14893 280 aaKnown RBP16.48■□□□□ 0.23
SMPD3-203ENST00000563226 CEACAM4O75871 244 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 PLP2Q04941 152 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 PRDX4Q13162 271 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 RTP5Q14D33 572 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 ACTBL2Q562R1 376 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 ZBTB37Q5TC79 503 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 CSNK2A3Q8NEV1 391 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 LILRB4Q8NHJ6 448 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 HPSE2Q8WWQ2 592 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 LRFN3Q9BTN0 628 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 FAAP24Q9BTP7 215 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 OR51B6Q9H340 312 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 ZNF701Q9NV72 531 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-203ENST00000563226 GVINP1Q7Z2Y8 2422 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 CEP250Q9BV73 2442 aa16.48■□□□□ 0.23
SMPD3-203ENST00000563226 PLSCR5A0PG75 271 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 NPY4RP50391 375 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 PER3P56645 1201 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 DHODHQ02127 395 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 MALLQ13021 153 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 LIN54Q6MZP7 749 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 TFAP2EQ6VUC0 442 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 LYG2Q86SG7 212 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 MYPOPQ86VE0 399 aaPredicted RBP16.47■□□□□ 0.23
SMPD3-203ENST00000563226 FBXL14Q8N1E6 418 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 PXT1Q8NFP0 134 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 OR13G1Q8NGZ3 307 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 TERB2Q8NHR7 220 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 DYRK2Q92630 601 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 ZNF75AQ96N20 296 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 TECTBQ96PL2 329 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 BOD1L1Q8NFC6 3051 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 A0A1W2PR80 420 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 AKR1C4P17516 323 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 CXCL2P19875 107 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 CD34P28906 385 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 HTR2BP41595 481 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 PDCD1Q15116 288 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 RPUSD3Q6P087 351 aaKnown RBP16.47■□□□□ 0.23
SMPD3-203ENST00000563226 BRICD5Q6PL45 260 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 RFPL4BQ6ZWI9 263 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 OSR2Q8N2R0 312 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 ARRDC1Q8N5I2 433 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 ZNF611Q8N823 705 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 OR8H1Q8NGG4 311 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 OR51F2Q8NH61 342 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 WBP1Q96G27 269 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 AK3Q9UIJ7 227 aa16.47■□□□□ 0.23
SMPD3-203ENST00000563226 NOP16Q9Y3C1 178 aaKnown RBP16.47■□□□□ 0.23
SMPD3-203ENST00000563226 C9orf170A2RU37 121 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 CA11O75493 328 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 MPC2O95563 127 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 IL2RAP01589 272 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 CHATP28329 748 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 APLNRP35414 380 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 NPBWR2P48146 333 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 DAZAP2Q15038 168 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-203ENST00000563226 MPPED2Q15777 294 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 SLC25A26Q70HW3 274 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 BHLHE23Q8NDY6 225 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 TAAR6Q96RI8 345 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 SULT4A1Q9BR01 284 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 IL36GQ9NZH8 169 aa16.46■□□□□ 0.23
SMPD3-203ENST00000563226 PQLC2LA1A4F0 135 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 AQP7O14520 342 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 CCSO14618 274 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 LILRA1O75019 489 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 CELA3BP08861 270 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 IGHV1-2P23083 117 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 OR10AD1Q8NGE0 317 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 ELMOD3Q96FG2 381 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 EHFQ9NZC4 300 aa16.46■□□□□ 0.22
SMPD3-203ENST00000563226 PI3P19957 117 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 SPINK2P20155 84 aa16.45■□□□□ 0.22
SMPD3-203ENST00000563226 OR3A3P47888 321 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms