RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 KIR3DL2P43630 455 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 ERVFRD-1P60508 538 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 SRSF4Q08170 494 aaKnown RBP10.29□□□□□ -0.76
SMAD3-208ENST00000558827 PDCD1Q15116 288 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 C16orf87Q6PH81 154 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 Q6YL49 198 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 ACP7Q6ZNF0 438 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 CALHM1Q8IU99 346 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 OR4M1Q8NGD0 313 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 C12orf43Q96C57 262 aaKnown RBP10.29□□□□□ -0.76
SMAD3-208ENST00000558827 MED30Q96HR3 178 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 CHIAQ9BZP6 476 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 MOB1AQ9H8S9 216 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 UNKLQ9H9P5 680 aaKnown RBP10.29□□□□□ -0.76
SMAD3-208ENST00000558827 S100A14Q9HCY8 104 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 AMBNQ9NP70 447 aa10.29□□□□□ -0.76
SMAD3-208ENST00000558827 DAPL1A0PJW8 107 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 PQLC2LA1A4F0 135 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 ANKRD61A6NGH8 418 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 F8VVB4 439 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 F8VWA3 439 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 RNASEK-C17orf49H0YIS7 233 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 J3QLW9 94 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 J3QT63 122 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 EBAG9O00559 213 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 NXPH2O95156 264 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 PIPP12273 146 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-208ENST00000558827 ZNF19P17023 458 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 PRDX2P32119 198 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 ALDH3A2P51648 485 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 OR12D2P58182 307 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 FOXL1Q12952 345 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 UBE2V2Q15819 145 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 ZBTB37Q5TC79 503 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 TMEM42Q69YG0 159 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 LHFPL3Q86UP9 236 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 POC1AQ8NBT0 407 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 RFKQ969G6 155 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 SLAMF9Q96A28 289 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 RNF166Q96A37 237 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-208ENST00000558827 HRASLS5Q96KN8 279 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 PLEKHA1Q9HB21 404 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 C19orf12Q9NSK7 152 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 USE1Q9NZ43 259 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 ZNF222Q9UK12 451 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 GMPPBQ9Y5P6 360 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 KPTNQ9Y664 436 aa10.28□□□□□ -0.76
SMAD3-208ENST00000558827 IGKV1-27A0A075B6S5 117 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 LOC107986453A0A1B0GWG9 222 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 DLGAP1O14490 977 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 PGA5P0DJD9 388 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 SNU13P55769 128 aaKnown RBP10.27□□□□□ -0.77
SMAD3-208ENST00000558827 ZFP1Q6P2D0 407 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 KRT74Q7RTS7 529 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 FAM220AQ7Z4H9 259 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF573Q86YE8 665 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 CMTM4Q8IZR5 234 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 KIR3DL3Q8N743 410 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 OR10AC1Q8NH08 325 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 RFT1Q96AA3 541 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 FGGYQ96C11 551 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 FAM96BQ9Y3D0 163 aa10.27□□□□□ -0.77
SMAD3-208ENST00000558827 H0YAE9 185 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 CLDN34H7C241 214 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 SULT1C4O75897 302 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 CRYBA1P05813 215 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 CCL1P22362 96 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 DUSP1P28562 367 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 POU3F4P49335 361 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 NANOS3P60323 173 aaKnown RBP10.26□□□□□ -0.77
SMAD3-208ENST00000558827 SNRPGP62308 76 aaKnown RBP10.26□□□□□ -0.77
SMAD3-208ENST00000558827 SMIM21Q3B7S5 101 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 ZBTB49Q6ZSB9 765 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 RNF144BQ7Z419 303 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 OR2G2Q8NGZ5 317 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 C17orf50Q8WW18 174 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 TRUB1Q8WWH5 349 aaKnown RBP10.26□□□□□ -0.77
SMAD3-208ENST00000558827 LGALS12Q96DT0 336 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 ADAT3Q96EY9 351 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-208ENST00000558827 SDSLQ96GA7 329 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 NRIP2Q9BQI9 281 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 DNTTIP1Q9H147 329 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 ZMAT3Q9HA38 289 aaKnown RBP10.26□□□□□ -0.77
SMAD3-208ENST00000558827 NOX4Q9NPH5 578 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 FRRS1LQ9P0K9 344 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 IL36RNQ9UBH0 155 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMAD3-208ENST00000558827 MYRFQ9Y2G1 1151 aa10.26□□□□□ -0.77
SMAD3-208ENST00000558827 MGAM2Q2M2H8 2515 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 MEIOCA2RUB1 952 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 NPFFO15130 113 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 ANGPTL7O43827 346 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 HTR1AP08908 422 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 CCL3L1P16619 93 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 COX7A1P24310 79 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 EEF1B2P24534 225 aaKnown RBP10.25□□□□□ -0.77
SMAD3-208ENST00000558827 CAV3P56539 151 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms