RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CALCRP30988 508 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 NTSP30990 170 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 HPDP32754 393 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 IDH3GP51553 393 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CARD18P57730 90 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 OR2B6P58173 313 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 RPL32P62910 135 aaKnown RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 HOXC5Q00444 222 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 IL1RL1Q01638 556 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF45Q02386 682 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 BNIP2Q12982 314 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 EIF4EBP1Q13541 118 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 QPRTQ15274 297 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CYP51A1Q16850 503 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 IMPG1Q17R60 797 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 OR2B11Q5JQS5 317 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 PDZK1Q5T2W1 519 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CARD17Q5XLA6 110 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 FAM71E1Q6IPT2 247 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 TNFAIP8L2Q6P589 184 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF562Q6V9R5 426 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ZCCHC23Q6ZST2 131 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 PAGE2Q7Z2X7 111 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 TMEM179BQ7Z7N9 219 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 WDFY1Q8IWB7 410 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 PEX5LQ8IYB4 626 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CLECL1Q8IZS7 167 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 LYPD1Q8N2G4 141 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 KDM8Q8N371 416 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 GTPBP8Q8N3Z3 284 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 KRTCAP2Q8N6L1 136 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 C3orf56Q8N813 242 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 WDR31Q8NA23 367 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 STEAP2Q8NFT2 490 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF675Q8TD23 568 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ZFP90Q8TF47 636 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF75CPQ92670 426 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CDKL2Q92772 493 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 RAB8BQ92930 207 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 HAVCR1Q96D42 359 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ARL5BQ96KC2 179 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ZFP3Q96NJ6 502 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 AMDHD1Q96NU7 426 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 IL4I1Q96RQ9 567 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 SECISBP2Q96T21 854 aaKnown RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 FAIM2Q9BWQ8 316 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CAPS2Q9BXY5 557 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CDC42EP4Q9H3Q1 356 aaKnown RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 PTGES2Q9H7Z7 377 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 NOX3Q9HBY0 568 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 MID1IP1Q9NPA3 183 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CTPS2Q9NRF8 586 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CBLN4Q9NTU7 201 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 EHFQ9NZC4 300 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 TMEM216Q9P0N5 145 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 MYEF2Q9P2K5 600 aaKnown RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 TBK1Q9UHD2 729 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ACOT9Q9Y305 439 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 NOSIPQ9Y314 301 aaKnown RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 EXOSC1Q9Y3B2 195 aaKnown RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CACNG2Q9Y698 323 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 IKBKGQ9Y6K9 419 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 NINQ8N4C6 2090 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 DNAH3Q8TD57 4116 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 HYDINQ4G0P3 5121 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ROS1P08922 2347 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 ARHGAP21Q5T5U3 1957 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 IGHV1-18A0A0C4DH31 117 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 IGHV3-64DA0A0J9YX35 117 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 FBLL1A6NHQ2 334 aaKnown RBP1.92□□□□□ -2.1
SCFD1-219ENST00000556413 ZSCAN5BA6NJL1 495 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 OR5H1A6NKK0 313 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 SYCE1LA8MT33 242 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 H0YL77 283 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 hCG_2039718K7EN88 272 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 FOXE1O00358 373 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-219ENST00000556413 UPK3AO75631 287 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 PSMG1O95456 288 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 CPSF4O95639 269 aaKnown RBP1.92□□□□□ -2.1
SCFD1-219ENST00000556413 OTCP00480 354 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 CD5P06127 495 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 CRHP06850 196 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 ADRA2AP08913 450 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 OR4A8P0C604 315 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 LINC00032P0C843 101 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 CECR9P0C854 216 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 GKN3PP0CG01 181 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 PRPS2P11908 318 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 CCL2P13500 99 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 HPGDP15428 266 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 SLC25A16P16260 332 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 PGCP20142 388 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 HNF1AP20823 631 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 COL8A2P25067 703 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 GCAP28676 217 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 RPL4P36578 427 aaKnown RBP1.92□□□□□ -2.1
SCFD1-219ENST00000556413 ASMTP46597 345 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 EFNA4P52798 201 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 SSTP61278 116 aa1.92□□□□□ -2.1
SCFD1-219ENST00000556413 ERVS71-1P61550 626 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms