RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ZNF43P17038 809 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 BTCP35070 178 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 THBS2P35442 1172 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 CLDN18P56856 261 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 ZNF345Q14585 488 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 PIANPQ8IYJ0 282 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 LGI3Q8N145 548 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 TMEM56Q96MV1 263 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 ADOQ96SZ5 270 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 CXorf36Q9H7Y0 433 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 TMEM56-RWDD3S4R434 201 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 PGPEP1LA6NFU8 196 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 MSTNO14793 375 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 HIST1H1CP16403 213 aaKnown RBP8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 MRPL23Q16540 153 aaKnown RBP8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 TMEM255BQ8WV15 326 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 SPACA5Q96QH8 159 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 PLEKHA2Q9HB19 425 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 ERRFI1Q9UJM3 462 aaPredicted RBP8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 OR51B2Q9Y5P1 312 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 FLVCR1Q9Y5Y0 555 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 HIST1H1DP16402 221 aaKnown RBP8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 HLA-BQ31612 363 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 PGGHGQ32M88 737 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 C19orf24Q9BVV8 132 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 C1orf43Q9BWL3 253 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 KCNIP2Q9NS61 270 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 ACER3Q9NUN7 267 aa8.05□□□□□ -1.12
GTF2A1-203ENST00000553612 H3BP45 60 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 NDUFS4O43181 175 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 CD74P04233 296 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 FURINP09958 794 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 HLA-DOBP13765 273 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 AGTRAPQ6RW13 159 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 SLC6A18Q96N87 628 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 ATOH8Q96SQ7 321 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 WDR61Q9GZS3 305 aaKnown RBP8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 SLC25A19Q9HC21 320 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 HDGFL3Q9Y3E1 203 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 INSIG2Q9Y5U4 225 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 IFITM10A6NMD0 228 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 NPIPB7O75200 414 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 CPMP14384 443 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 FCARP24071 287 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 BSXQ3C1V8 233 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 EMC4Q5J8M3 183 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 MORN1Q5T089 497 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 C3orf56Q8N813 242 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 UBE2E3Q969T4 207 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 NRN1Q9NPD7 142 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 FAM208AQ9UK61 1670 aaKnown RBP8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 TRBV7-9A0A0J9YWB2 115 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 CSNK1G2P78368 415 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 SLC25A43Q8WUT9 341 aaPredicted RBP8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 FAM71F1Q96KD3 344 aaPredicted RBP8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 PGLYRP3Q96LB9 341 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 PRSS50Q9UI38 385 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 LOC102723971A0A1B0GUV8 181 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 ZNF749O43361 778 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 PPBPP02775 128 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 TIA1P31483 386 aaKnown RBP eCLIP8.04□□□□□ -1.123e-9■■■■□ 26.4
GTF2A1-203ENST00000553612 SRSF2Q01130 221 aaKnown RBP8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 HLA-DQA1Q5Y7H0 255 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 OR52M1Q8NGK5 317 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 OR2I1PQ8NGU4 316 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 RTP4Q96DX8 246 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 GPR20Q99678 358 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 SH2D2AQ9NP31 389 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 HEPACAM2A8MVW5 462 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 S1PR2O95136 353 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 ARR3P36575 388 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 FZD2Q14332 565 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 MEP1BQ16820 701 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 FAM71F2Q6NXP2 309 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 IL21Q9HBE4 155 aa8.04□□□□□ -1.12
GTF2A1-203ENST00000553612 NWD1Q149M9 1564 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 ONECUT2O95948 504 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 FGF9P31371 208 aaPredicted RBP8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 HRH1P35367 487 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 PRICKLE4Q2TBC4 344 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 ENTPD8Q5MY95 495 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 OR51A4Q8NGJ6 313 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 OR51A2Q8NGJ7 313 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 LYPD6BQ8NI32 183 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 ZNF681Q96N22 645 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 NXT1Q9UKK6 140 aaKnown RBP8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 MDH2P40926 338 aaKnown RBP8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 MUCL1Q96DR8 90 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 PRAP1Q96NZ9 151 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 MESP1Q9BRJ9 268 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 SPHK2Q9NRA0 654 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 C7orf71A4D174 169 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 MPZP25189 248 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 PMP22Q01453 160 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 GLYATL3Q5SZD4 288 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 LIMS2Q7Z4I7 341 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 C10orf111Q8N326 155 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 ZNF479Q96JC4 524 aa8.03□□□□□ -1.12
GTF2A1-203ENST00000553612 C2orf50Q96LR7 162 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms